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Entry version 70 (13 Feb 2019)
Sequence version 1 (20 Feb 2007)
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Protein

Apical endosomal glycoprotein

Gene

Mamdc4

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Probably involved in the sorting and selective transport of receptors and ligands across polarized epithelia.By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processProtein transport, Transport

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Apical endosomal glycoprotein
Alternative name(s):
MAM domain-containing protein 4
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Mamdc4Imported
Synonyms:Aegp, Gm995
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 2

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2685841 Mamdc4

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini23 – 1159ExtracellularSequence analysisAdd BLAST1137
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei1160 – 1180HelicalSequence analysisAdd BLAST21
Topological domaini1181 – 1228CytoplasmicSequence analysisAdd BLAST48

Keywords - Cellular componenti

Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 21Sequence analysisAdd BLAST21
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000028657922 – 1228Apical endosomal glycoproteinAdd BLAST1207

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi204N-linked (GlcNAc...) asparagineSequence analysis1
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi230 ↔ 242PROSITE-ProRule annotationBy similarity
Disulfide bondi237 ↔ 255PROSITE-ProRule annotationBy similarity
Disulfide bondi249 ↔ 266PROSITE-ProRule annotationBy similarity
Glycosylationi290N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi340N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi458 ↔ 469PROSITE-ProRule annotationBy similarity
Disulfide bondi465 ↔ 482PROSITE-ProRule annotationBy similarity
Disulfide bondi476 ↔ 491PROSITE-ProRule annotationBy similarity
Glycosylationi641N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi841N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
A2AJA7

PRoteomics IDEntifications database

More...
PRIDEi
A2AJA7

PTM databases

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
A2AJA7

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000026941 Expressed in 102 organ(s), highest expression level in small intestine

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
A2AJA7 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
A2AJA7 MM

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...
ProteinModelPortali
A2AJA7

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
A2AJA7

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini28 – 49LDL-receptor class A 1; truncatedPROSITE-ProRule annotationAdd BLAST22
Domaini65 – 223MAM 1PROSITE-ProRule annotationAdd BLAST159
Domaini229 – 267LDL-receptor class A 2PROSITE-ProRule annotationAdd BLAST39
Domaini270 – 426MAM 2PROSITE-ProRule annotationAdd BLAST157
Domaini457 – 492LDL-receptor class A 3PROSITE-ProRule annotationAdd BLAST36
Domaini492 – 649MAM 3PROSITE-ProRule annotationAdd BLAST158
Domaini659 – 815MAM 4PROSITE-ProRule annotationAdd BLAST157
Domaini817 – 975MAM 5PROSITE-ProRule annotationAdd BLAST159
Domaini977 – 1144MAM 6PROSITE-ProRule annotationAdd BLAST168

Keywords - Domaini

Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IGZP Eukaryota
ENOG410XPKY LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000162046

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000033827

The HOVERGEN Database of Homologous Vertebrate Genes

More...
HOVERGENi
HBG004185

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
A2AJA7

Identification of Orthologs from Complete Genome Data

More...
OMAi
FYHYLHG

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00112 LDLa, 3 hits
cd06263 MAM, 6 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR013320 ConA-like_dom_sf
IPR036055 LDL_receptor-like_sf
IPR023415 LDLR_class-A_CS
IPR002172 LDrepeatLR_classA_rpt
IPR000998 MAM_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00057 Ldl_recept_a, 1 hit
PF00629 MAM, 6 hits

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00261 LDLRECEPTOR

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00192 LDLa, 3 hits
SM00137 MAM, 6 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49899 SSF49899, 6 hits
SSF57424 SSF57424, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS01209 LDLRA_1, 2 hits
PS50068 LDLRA_2, 2 hits
PS50060 MAM_2, 6 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: A2AJA7-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MCLPSHLLST WVLFMAAQSL GKTWLPNHCR SPIKAVCNFV CDCGDCSDET
60 70 80 90 100
QCGFHGASTI PSTSFTCNFE QDSCGWQDIS TSGYRWLRDR AGAVLHGPGP
110 120 130 140 150
HSDHTHGTDL GWYMAVGTHS GKEPSTATLR SPVMREAAPT CELRLWYHIA
160 170 180 190 200
SRDVAELRLD LTHGVETLTL WQTSGPWGPG WQELAVNTGR IQGDFKVTFS
210 220 230 240 250
ATRNATHRGA VALDDVEFRD CGLPIPQARC PLGHHHCQNK ACVEPHQLCD
260 270 280 290 300
GEDNCGDRSD EDPLICSHHM ATDFETGLGP WNQLEGWTRN HSAGSMVSPA
310 320 330 340 350
WPHRDHSRNS AYGFFLISVA KPGTTAVLYS PEFQGSVSNN CSFTFYYYLH
360 370 380 390 400
GSEASHFQLF LQAQGLNTPQ VPVLLRSRHG ELGTAWVRDR VDIQSAHPFR
410 420 430 440 450
ILLAGETGPG GVVGLDDLIM SSHCMLVPAM STLQSSLSGP VPLALYPQTS
460 470 480 490 500
IKLPQQTCEP GHLSCGDLCV PPEQLCDFQK HCAEGEDEHK CGTTDFESAS
510 520 530 540 550
AGGWEDISVG KLQWQWVEAQ EKSKPAGDAN RDAPGHFLSL QKAWGQLRSE
560 570 580 590 600
ARALTPALGP SGPHCELHMA YYFQSHPQGF LALVVVENGF RELLWQAPGG
610 620 630 640 650
GSGSWTEEKI ILGARRRPFQ LEFVSLVDLD GPGQQGAGVD NVTLRDCNPM
660 670 680 690 700
VTTESDQELS CNFERDSCSW HTGHLTDAHW HRIKSHGSQL DHTTGQGFFM
710 720 730 740 750
FLDPTDPPAR GQGALLLTRP QVPVVPKECL SFWYRLYGPQ IGTLCLAMRR
760 770 780 790 800
EREEDILLWS RSGTHGNRWH QAWVTLHHQP EASTKYQLLF EGLRNGYHGT
810 820 830 840 850
MALDDIAVRP GPCWAPKSCS FEDSDCGFSP GGWGLWTHQS NASGLASWGP
860 870 880 890 900
WIDHTTGTAQ GHYMVVDTSP NVLPKGHVAA LTSEEHQPLS QPACLTFWYH
910 920 930 940 950
MSVPNPGTLR VHVEESTRRQ ELSISAHGRS AWRLGSVNVQ AEQAWKVVFE
960 970 980 990 1000
AVAAGVEYSY MALDDISLQD GPCPQPGSCD FETGLCGWSH LPWPSLGGYS
1010 1020 1030 1040 1050
WDWSSGATPS RYPQPSVDHT LGTEAGHFAF FETSVLGPGG QAAWLRSEPL
1060 1070 1080 1090 1100
PATTVSCLRF WYYMGFPEHF YKGELRVLLS SARGQLAVWY QGGHLRDQWL
1110 1120 1130 1140 1150
QVQIELSNSE EFQIVFEATL GGQPALGPIA IDDVQYLAGQ QCKQPSPSQG
1160 1170 1180 1190 1200
EVAAPVSVPV AVGGALLFFM FLVLMGLGGW HWLQKQHCPG QRSTDAAASG
1210 1220
FANILFNADH VTLPESITSN PQSPPDLA
Note: Gene prediction based on similarity to rat ortholog. No experimental confirmation available.
Length:1,228
Mass (Da):134,830
Last modified:February 20, 2007 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iAD4F60B903644BAB
GO
Isoform 2 (identifier: A2AJA7-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     578-656: Missing.

Note: Gene prediction based on similarity to human ortholog. No experimental confirmation available.
Show »
Length:1,149
Mass (Da):126,302
Checksum:i84BBBEA7D71D8288
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
D3YY20D3YY20_MOUSE
Apical endosomal glycoprotein
Mamdc4
1,232Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6QNH6F6QNH6_MOUSE
Apical endosomal glycoprotein
Mamdc4
1,130Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence CAM25169 differs from that shown. Reason: Erroneous gene model prediction.Curated

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_026433578 – 656Missing in isoform 2. CuratedAdd BLAST79

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AL732590 Genomic DNA Translation: CAM25169.1 Sequence problems.
AL732590 Genomic DNA Translation: CAM25170.1

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
Mm.289046

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000114223; ENSMUSP00000109861; ENSMUSG00000026941 [A2AJA7-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL732590 Genomic DNA Translation: CAM25169.1 Sequence problems.
AL732590 Genomic DNA Translation: CAM25170.1
UniGeneiMm.289046

3D structure databases

ProteinModelPortaliA2AJA7
SMRiA2AJA7
ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSitePlusiA2AJA7

Proteomic databases

PaxDbiA2AJA7
PRIDEiA2AJA7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000114223; ENSMUSP00000109861; ENSMUSG00000026941 [A2AJA7-1]

Organism-specific databases

MGIiMGI:2685841 Mamdc4

Phylogenomic databases

eggNOGiENOG410IGZP Eukaryota
ENOG410XPKY LUCA
GeneTreeiENSGT00940000162046
HOGENOMiHOG000033827
HOVERGENiHBG004185
InParanoidiA2AJA7
OMAiFYHYLHG

Miscellaneous databases

Protein Ontology

More...
PROi
PR:A2AJA7

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000026941 Expressed in 102 organ(s), highest expression level in small intestine
ExpressionAtlasiA2AJA7 baseline and differential
GenevisibleiA2AJA7 MM

Family and domain databases

CDDicd00112 LDLa, 3 hits
cd06263 MAM, 6 hits
InterProiView protein in InterPro
IPR013320 ConA-like_dom_sf
IPR036055 LDL_receptor-like_sf
IPR023415 LDLR_class-A_CS
IPR002172 LDrepeatLR_classA_rpt
IPR000998 MAM_dom
PfamiView protein in Pfam
PF00057 Ldl_recept_a, 1 hit
PF00629 MAM, 6 hits
PRINTSiPR00261 LDLRECEPTOR
SMARTiView protein in SMART
SM00192 LDLa, 3 hits
SM00137 MAM, 6 hits
SUPFAMiSSF49899 SSF49899, 6 hits
SSF57424 SSF57424, 2 hits
PROSITEiView protein in PROSITE
PS01209 LDLRA_1, 2 hits
PS50068 LDLRA_2, 2 hits
PS50060 MAM_2, 6 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiAEGP_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A2AJA7
Secondary accession number(s): A2AJA6
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: February 20, 2007
Last modified: February 13, 2019
This is version 70 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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