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Protein
Submitted name:

Protein SOGA1

Gene

Soga1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein SOGA1Imported
Gene namesi
Name:Soga1Imported
Synonyms:9830001H06RikImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:2444575 Soga1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiA2ACV6
PeptideAtlasiA2ACV6
PRIDEiA2ACV6

PTM databases

iPTMnetiA2ACV6

Expressioni

Gene expression databases

BgeeiENSMUSG00000055485 Expressed in 131 organ(s), highest expression level in cerebellum
GenevisibleiA2ACV6 MM

Interactioni

Protein-protein interaction databases

IntActiA2ACV6, 18 interactors

Structurei

3D structure databases

ProteinModelPortaliA2ACV6
SMRiA2ACV6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1065 – 1203DUF4482InterPro annotationAdd BLAST139

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili216 – 243Sequence analysisAdd BLAST28
Coiled coili245 – 279Sequence analysisAdd BLAST35
Coiled coili308 – 349Sequence analysisAdd BLAST42
Coiled coili400 – 420Sequence analysisAdd BLAST21
Coiled coili448 – 482Sequence analysisAdd BLAST35
Coiled coili505 – 546Sequence analysisAdd BLAST42
Coiled coili816 – 843Sequence analysisAdd BLAST28
Coiled coili991 – 1011Sequence analysisAdd BLAST21
Coiled coili1079 – 1113Sequence analysisAdd BLAST35

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG4787 Eukaryota
ENOG410XUHJ LUCA
GeneTreeiENSGT00530000063889
HOGENOMiHOG000231278
HOVERGENiHBG080205
OMAiQKFWSQE
OrthoDBiEOG091G009R
PhylomeDBiA2ACV6
TreeFamiTF331853

Family and domain databases

InterProiView protein in InterPro
IPR027882 DUF4482
IPR027881 SOGA
PfamiView protein in Pfam
PF14818 DUF4482, 1 hit
PF11365 SOGA, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A2ACV6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
METPAGESSA RGYGPPPAPA PAAERKKSHR APSPARPKDV AGWSLAKGRR
60 70 80 90 100
GTGPGSATAC GTASSARPDK KGRAVAPGTR GTGPRVAGVR TGVRAKGRPR
110 120 130 140 150
PGTGPRPPPP PPSLTDSSSE VSDCASEEAR QLGLELALSS DAESAAGGPA
160 170 180 190 200
GTRTGQPPQP AQSGQQPPRP PASPDEPSVA ASSVGSSRLP LSASLAFSDL
210 220 230 240 250
TEEMLDCGPG GLVRELEELR SENDYLKDEI EELRAEMLEM RDVYMEEDVY
260 270 280 290 300
QLQELRQQLD QASKTCRILQ YRLRKAERRS LRAAQTGQVD GELIRGLEQD
310 320 330 340 350
VKVSKDISMR LHKELEVVEK KRMRLEEENE GLRQRLIETE LAKQVLQTEL
360 370 380 390 400
DRPREHSLKK RGTRSLGKTD KKPTAQEDSA DLKCQLHFAK EESALMCKKL
410 420 430 440 450
TKLAKENDSM KEELLKYRSL YGDLDAALSA EELADAPHSR ETELKVHLKL
460 470 480 490 500
VEEEANLLSR RIVELEVENR GLRAEMDDMK DHGGGGGPEA RLAFSSLGGE
510 520 530 540 550
CGESLAELRR HLQFVEEEAE LLRRSSAELE DQNKLLLNEL AKYRSEHELD
560 570 580 590 600
VTLSEDSCSV LSEPSQEELA AAKLQIGELS GKVKKLQYEN RVLLSNLQRC
610 620 630 640 650
DLASCQSTRP MLETDAEAGD SAQCVPAPLG ETLEPHAARL CRAREAEALP
660 670 680 690 700
GLREQAALVS KAIDVLVADA NGFSVGLRLC LDNECADLRL HEAPDNSEGP
710 720 730 740 750
RDAKLIHAIL VRLSVLQQEL NAFTRKADVA LGSSGKEQPE PFPALPALGS
760 770 780 790 800
QGPAKEIMLS KDLGSDFQPP DFRDLLEWEP RIREAFRTGD LESKPDPSRN
810 820 830 840 850
FRPYRAEDND SYASEIKDLQ LVLAEAHDSL RGLQEQLSQE RQLRKEEADS
860 870 880 890 900
FNQKMVQLKE DQQRALLRRE FELQSLSLQR RLEQKFWSQE KNILVQESQQ
910 920 930 940 950
FKHNFLLLFM KLRWFLKRWR QGKVLPSEED DFLEVNSMKE LYLLMEEEEM
960 970 980 990 1000
NAQHSDNKAC TGESWTQNTP NECIKTLADM KVTLKELCWL LQDERRGLTE
1010 1020 1030 1040 1050
LQQQFAKAKA TWETERAELK GHASQMELKA GKGASERPGP DWKAALQRER
1060 1070 1080 1090 1100
EEQQHLLAES YSAVMELTRQ LQLSERHWSQ EKLQLVERLQ GEKQQVEQQV
1110 1120 1130 1140 1150
KELQNRLSQL QKAAEPWVLK HSDMEKQDNS WKEARSEKTH DKEGVSEAEL
1160 1170 1180 1190 1200
GGTGLKRTKS VSSMSEFESL LDCSPYLAGG DARNKKLPNG PAFAFVSTEP
1210 1220 1230 1240 1250
VEPEKDAKEK AGLSTRDCSH IGSLACQEPA GRQMQRSYTA PDKTGIRVYY
1260 1270 1280 1290 1300
SPPVARRLGV PVVHDKEGKI LIEPGFLFTT AKPKESAEAD GLAESSYSRW
1310 1320 1330 1340 1350
LCNFSRQRLD GGSGASTSGS GPAFPALHDF EMSGNMSDDM KEITNCVRQA
1360 1370 1380 1390 1400
MRSGSLERKV KNTSSQTVGV ATVGTQTIRT VSVGLQTDPP RSSLHSKSWS
1410 1420 1430 1440 1450
PRSSSLVSVR SKQISSSLDK VHSRIERPCC SPKYGSPKLQ RRSVSKLDST
1460 1470 1480 1490 1500
KDRSLWNLHQ GKQNGSAWAR STTTRDSPVL RNINDGLSSL FSVVEHSGST
1510 1520 1530 1540 1550
ESVWKLGMSE ARTKPEPPKY GIVQEFFRNV CGRAPSPTTA AGEESCKKPE
1560 1570 1580 1590 1600
PLSPASYHQP EGVSRILNKK AAKAGGSEEV RPTMLSQVGK DGILRDGDGS
1610 1620 1630 1640 1650
LILPSEDAVC DCSAQSLASC FIRPSRNTIR HSPSKCRLHP SESGWGGEER

AAPQ
Length:1,654
Mass (Da):183,145
Last modified:February 20, 2007 - v1
Checksum:i6B14B640F9022498
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
E1U8D0SOGA1_MOUSE
Protein SOGA1
Soga1 Soga
1,418Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL669932 Genomic DNA No translation available.
RefSeqiNP_001158135.1, NM_001164663.1
UniGeneiMm.79466

Genome annotation databases

EnsembliENSMUST00000069098; ENSMUSP00000066556; ENSMUSG00000055485
GeneIDi320706
KEGGimmu:320706
UCSCiuc008nol.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL669932 Genomic DNA No translation available.
RefSeqiNP_001158135.1, NM_001164663.1
UniGeneiMm.79466

3D structure databases

ProteinModelPortaliA2ACV6
SMRiA2ACV6
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiA2ACV6, 18 interactors

PTM databases

iPTMnetiA2ACV6

Proteomic databases

MaxQBiA2ACV6
PeptideAtlasiA2ACV6
PRIDEiA2ACV6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000069098; ENSMUSP00000066556; ENSMUSG00000055485
GeneIDi320706
KEGGimmu:320706
UCSCiuc008nol.2 mouse

Organism-specific databases

CTDi140710
MGIiMGI:2444575 Soga1

Phylogenomic databases

eggNOGiKOG4787 Eukaryota
ENOG410XUHJ LUCA
GeneTreeiENSGT00530000063889
HOGENOMiHOG000231278
HOVERGENiHBG080205
OMAiQKFWSQE
OrthoDBiEOG091G009R
PhylomeDBiA2ACV6
TreeFamiTF331853

Miscellaneous databases

ChiTaRSiSoga1 mouse
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000055485 Expressed in 131 organ(s), highest expression level in cerebellum
GenevisibleiA2ACV6 MM

Family and domain databases

InterProiView protein in InterPro
IPR027882 DUF4482
IPR027881 SOGA
PfamiView protein in Pfam
PF14818 DUF4482, 1 hit
PF11365 SOGA, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA2ACV6_MOUSE
AccessioniPrimary (citable) accession number: A2ACV6
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: October 10, 2018
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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