Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Collagen, type IX, alpha 3

Gene

Col9a3

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • extracellular matrix organization Source: GO_Central
  • female gonad development Source: UniProtKB
  • male gonad development Source: UniProtKB

Enzyme and pathway databases

ReactomeiR-MMU-1650814 Collagen biosynthesis and modifying enzymes
R-MMU-186797 Signaling by PDGF
R-MMU-2022090 Assembly of collagen fibrils and other multimeric structures
R-MMU-216083 Integrin cell surface interactions
R-MMU-3000178 ECM proteoglycans
R-MMU-419037 NCAM1 interactions
R-MMU-8948216 Collagen chain trimerization

Names & Taxonomyi

Protein namesi
Submitted name:
Collagen, type IX, alpha 3Imported
Submitted name:
Procollagen, type IX, alpha 3Imported
Gene namesi
Name:Col9a3Imported
ORF Names:mCG_140084Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:894686 Col9a3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_501508601222 – 680Sequence analysisAdd BLAST659

Expressioni

Gene expression databases

BgeeiENSMUSG00000027570 Expressed in 261 organ(s), highest expression level in utricle of membranous labyrinth

Interactioni

Protein-protein interaction databases

ComplexPortaliCPX-2970 Collagen type IX trimer
STRINGi10090.ENSMUSP00000099348

Family & Domainsi

Keywords - Domaini

CollagenImported, SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
GeneTreeiENSGT00900000140850
HOGENOMiHOG000085653
HOVERGENiHBG004933
KOiK08131
OMAiFKGPTGY
OrthoDBiEOG091G0C0F

Family and domain databases

InterProiView protein in InterPro
IPR008160 Collagen
PfamiView protein in Pfam
PF01391 Collagen, 6 hits

Sequencei

Sequence statusi: Complete.

A2ACT7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTGAPALALL LLGQLLTATS AQKVGPRGPP GPQGPPGKPG KDGIDGEAGP
60 70 80 90 100
PGLPGLPGPK GTSGKPGKPG EAGLPGLPGV DGLTGRDGPA GPKGAPGERG
110 120 130 140 150
SLGPPGPPGL GGKGLPGPPG EAGVSGLPGG IGLRGPPGPS GLPGLPGLPG
160 170 180 190 200
PPGPPGNPGV LPEGATDLQC PAICPPGPPG PPGMPGFKGP TGYKGEQGEV
210 220 230 240 250
GKDGEKGSPG PPGPPGIPGT VGLQGPRGLR GLPGPLGPPG DRGPIGFRGP
260 270 280 290 300
PGTPGAPGKV GDRGERGPEG FRGPKGDLGR PGPKGIPGMA GPGGEPGMPG
310 320 330 340 350
KDGKDGVPGL DGEKGEAGRN GGQGEKGPNG LPGLPGRAGS KGEKGEPGRT
360 370 380 390 400
GELGEAGPSG EPGIPGDVGV PGERGEAGHR GSVGALGPQG PPGAPGIRGF
410 420 430 440 450
QGQKGSTGDP GLPGPQGLRG DVGDRGPGGA TGPKGDQGIA GSDGLPGDKG
460 470 480 490 500
ELGPNGPVGQ KGESGSRGEL GPKGIQGPNG TSGVQGVPGP PGPLGLQGVQ
510 520 530 540 550
GVPGITGKPG VPGKEASEQR IRELCGGMIS EQIAQLAAHL RKPLAPGSIG
560 570 580 590 600
RPGPAGPPGP PGPPGSIGHP GARGPPGYRG PTGELGDPGP RGSQGDRGDK
610 620 630 640 650
GATGAGLDGP AGDQGYQGPQ GVPGISKDGR DGAHGEPGLP GDPGLPGAAG
660 670 680
AQGTPGICDT SACQGAVLGG GGEKSGPRSS
Length:680
Mass (Da):63,475
Last modified:February 20, 2007 - v1
Checksum:iE898FA049A4D9D2E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL669926 Genomic DNA No translation available.
CH466626 Genomic DNA Translation: EDL07344.1
RefSeqiNP_034066.2, NM_009936.2
UniGeneiMm.141312

Genome annotation databases

EnsembliENSMUST00000103059; ENSMUSP00000099348; ENSMUSG00000027570
ENSMUST00000132527; ENSMUSP00000128718; ENSMUSG00000027570
GeneIDi12841
KEGGimmu:12841
UCSCiuc008ojl.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL669926 Genomic DNA No translation available.
CH466626 Genomic DNA Translation: EDL07344.1
RefSeqiNP_034066.2, NM_009936.2
UniGeneiMm.141312

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

ComplexPortaliCPX-2970 Collagen type IX trimer
STRINGi10090.ENSMUSP00000099348

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000103059; ENSMUSP00000099348; ENSMUSG00000027570
ENSMUST00000132527; ENSMUSP00000128718; ENSMUSG00000027570
GeneIDi12841
KEGGimmu:12841
UCSCiuc008ojl.1 mouse

Organism-specific databases

CTDi1299
MGIiMGI:894686 Col9a3

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
GeneTreeiENSGT00900000140850
HOGENOMiHOG000085653
HOVERGENiHBG004933
KOiK08131
OMAiFKGPTGY
OrthoDBiEOG091G0C0F

Enzyme and pathway databases

ReactomeiR-MMU-1650814 Collagen biosynthesis and modifying enzymes
R-MMU-186797 Signaling by PDGF
R-MMU-2022090 Assembly of collagen fibrils and other multimeric structures
R-MMU-216083 Integrin cell surface interactions
R-MMU-3000178 ECM proteoglycans
R-MMU-419037 NCAM1 interactions
R-MMU-8948216 Collagen chain trimerization

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000027570 Expressed in 261 organ(s), highest expression level in utricle of membranous labyrinth

Family and domain databases

InterProiView protein in InterPro
IPR008160 Collagen
PfamiView protein in Pfam
PF01391 Collagen, 6 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA2ACT7_MOUSE
AccessioniPrimary (citable) accession number: A2ACT7
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: November 7, 2018
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again