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Protein
Submitted name:

Secreted and transmembrane protein 1A

Gene

Sectm1a

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Secreted and transmembrane protein 1AImported
Submitted name:
cDNA sequence BC010462, isoform CRA_cImported
Gene namesi
Name:Sectm1aImported
Synonyms:BC010462Imported
ORF Names:mCG_2143Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:2384805 Sectm1a

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei166 – 187HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_501508601328 – 192Sequence analysisAdd BLAST165

Expressioni

Gene expression databases

BgeeiENSMUSG00000025165 Expressed in 50 organ(s), highest expression level in zone of skin

Interactioni

GO - Molecular functioni

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410JFYD Eukaryota
ENOG411174Z LUCA
GeneTreeiENSGT00530000064499
HOVERGENiHBG061092
OrthoDBiEOG091G0QEP
TreeFamiTF336992

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR033231 SECTM1
PANTHERiPTHR15123 PTHR15123, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

A2ABP9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MMTCPSVPAI PTLWLFSILL LVVSLNAQNK SWDNPICTEG ILSVPRGNPA
60 70 80 90 100
VMTCNISNTF TDVTIQLSAN GKDKTIFDKK PQGNFSWRGW ELQVQGGLAQ
110 120 130 140 150
LVIKDTQDDH TGIYLWQLHG RQRCYKNITL NILEPSNEDK VPDTTLFTSF
160 170 180 190
PDHAKSSPIE GKPGTLVGVI TVIFILGVAG FITFIYYRHR RS
Length:192
Mass (Da):21,423
Last modified:February 20, 2007 - v1
Checksum:i0336967DC1F7B2D2
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q921W8SCT1A_MOUSE
Secreted and transmembrane protein ...
Sectm1a
192Annotation score:
A2ABP7A2ABP7_MOUSE
Secreted and transmembrane protein ...
Sectm1a BC010462, mCG_2143
174Annotation score:
A2ABP8A2ABP8_MOUSE
Secreted and transmembrane protein ...
Sectm1a
89Annotation score:
Q3TBH1Q3TBH1_MOUSE
Secreted and transmembrane protein ...
Sectm1a BC010462, mCG_2143
65Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL662887 Genomic DNA No translation available.
CH466558 Genomic DNA Translation: EDL34824.1
RefSeqiNP_663348.2, NM_145373.2
XP_006532811.1, XM_006532748.3
XP_006532813.1, XM_006532750.3
XP_017169902.1, XM_017314413.1
UniGeneiMm.69553

Genome annotation databases

EnsembliENSMUST00000026162; ENSMUSP00000026162; ENSMUSG00000025165
GeneIDi209588
KEGGimmu:209588
UCSCiuc007mve.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL662887 Genomic DNA No translation available.
CH466558 Genomic DNA Translation: EDL34824.1
RefSeqiNP_663348.2, NM_145373.2
XP_006532811.1, XM_006532748.3
XP_006532813.1, XM_006532750.3
XP_017169902.1, XM_017314413.1
UniGeneiMm.69553

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000026162; ENSMUSP00000026162; ENSMUSG00000025165
GeneIDi209588
KEGGimmu:209588
UCSCiuc007mve.1 mouse

Organism-specific databases

CTDi209588
MGIiMGI:2384805 Sectm1a

Phylogenomic databases

eggNOGiENOG410JFYD Eukaryota
ENOG411174Z LUCA
GeneTreeiENSGT00530000064499
HOVERGENiHBG061092
OrthoDBiEOG091G0QEP
TreeFamiTF336992

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000025165 Expressed in 50 organ(s), highest expression level in zone of skin

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR033231 SECTM1
PANTHERiPTHR15123 PTHR15123, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA2ABP9_MOUSE
AccessioniPrimary (citable) accession number: A2ABP9
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: November 7, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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