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Protein
Submitted name:

E3 ubiquitin-protein ligase TRIM39

Gene

TRIM39

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
E3 ubiquitin-protein ligase TRIM39Imported
Gene namesi
Name:TRIM39Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 6

Organism-specific databases

EuPathDBiHostDB:ENSG00000204599.14
HGNCiHGNC:10065 TRIM39

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000204599

PTM / Processingi

Proteomic databases

PRIDEiA2AAZ6

Expressioni

Gene expression databases

BgeeiENSG00000204599

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini29 – 70RING-typeInterPro annotationAdd BLAST42
Domaini102 – 143B box-typeInterPro annotationAdd BLAST42

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili190 – 221Sequence analysisAdd BLAST32

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410ITFV Eukaryota
ENOG410YDPJ LUCA
GeneTreeiENSGT00760000118893
HOGENOMiHOG000234133
HOVERGENiHBG001357

Family and domain databases

CDDicd00021 BBOX, 1 hit
Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR000315 Znf_B-box
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PfamiView protein in Pfam
PF00643 zf-B_box, 1 hit
SMARTiView protein in SMART
SM00336 BBOX, 1 hit
SM00184 RING, 1 hit
PROSITEiView protein in PROSITE
PS50119 ZF_BBOX, 1 hit
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequencei

Sequence statusi: Fragment.

A2AAZ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAETSLLEAG ASAASTAAAL ENLQVEASCS VCLEYLKEPV IIECGHNFCK
60 70 80 90 100
ACITRWWEDL ERDFPCPVCR KTSRYRSLRP NRQLGSMVEI AKQLQAVKRK
110 120 130 140 150
IRDESLCPQH HEALSLFCYE DQEAVCLICA ISHTHRAHTV VPLDDATQEY
160 170 180 190 200
KEKLQKCLEP LEQKLQEITR CKSSEEKKPG ELKRLVESRR QQILREFEEL
210 220 230 240 250
HRRLDEEQQV LLSRLEEEEQ DILQRLRENA AHLGDKRRDL AHLAAEVEGK
260
CLQSGFEMLK
Length:260
Mass (Da):30,010
Last modified:October 5, 2016 - v8
Checksum:i59D0C3794B84C26A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei260Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL662795 Genomic DNA No translation available.
AL662832 Genomic DNA No translation available.
AL773535 Genomic DNA No translation available.
BX248580 Genomic DNA No translation available.
BX294158 Genomic DNA No translation available.
BX927214 Genomic DNA No translation available.
CR759281 Genomic DNA No translation available.
CR759928 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000428728; ENSP00000406019; ENSG00000204599
ENST00000431871; ENSP00000388969; ENSG00000230308
ENST00000440130; ENSP00000407903; ENSG00000224994
ENST00000442914; ENSP00000389389; ENSG00000226437
ENST00000447077; ENSP00000400264; ENSG00000206495
ENST00000449396; ENSP00000415414; ENSG00000232839
ENST00000450421; ENSP00000416850; ENSG00000229929
UCSCiuc063mrh.1 human

Similar proteinsi

Entry informationi

Entry nameiA2AAZ6_HUMAN
AccessioniPrimary (citable) accession number: A2AAZ6
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: October 5, 2016
Last modified: July 18, 2018
This is version 103 of the entry and version 8 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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