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UniProtKB - A2A8U2 (TM201_MOUSE)

Entry version 87 (13 Feb 2019)
Sequence version 1 (20 Feb 2007)
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Protein

Transmembrane protein 201

Gene

Tmem201

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Involved in nuclear movement during fibroblast polarization and migration (PubMed:22349700). May recruit Ran GTPase to the nuclear periphery (By similarity).By similarity1 Publication
Isoform 2: May define a distinct membrane domain in the vicinity of the mitotic spindle. Involved in the organization of the nuclear envelope implicating EMD, SUN1 and A-type lamina.By similarity
Isoform 3: Proposed to be involved in actin-dependent nuclear movement; via SUN2 associates with transmembrane actin-associated nuclear (TAN) lines which are bound to F-actin cables and couple the nucleus to retrograde actin flow.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • actin filament binding Source: MGI
  • lamin binding Source: MGI
View the complete GO annotation on QuickGO ...

GO - Biological processi

  • centrosome localization Source: MGI
  • fibroblast migration Source: MGI
  • nuclear envelope organization Source: MGI
  • nuclear migration Source: MGI
  • nuclear migration along microtubule Source: GO_Central
  • protein localization to nuclear envelope Source: MGI
View the complete GO annotation on QuickGO ...

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Transmembrane protein 201
Alternative name(s):
Spindle-associated membrane protein 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Tmem201
Synonyms:D4Ertd429e, Net5, Samp1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 4

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...MGIi		MGI:1196277 Tmem201

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini1 – 214NuclearBy similarityAdd BLAST214
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei215 – 235HelicalSequence analysisAdd BLAST21
Topological domaini236 – 297Perinuclear spaceCuratedAdd BLAST62
Transmembranei298 – 318HelicalSequence analysisAdd BLAST21
Topological domaini319 – 322NuclearCurated4
Transmembranei323 – 343HelicalSequence analysisAdd BLAST21
Topological domaini344 – 356Perinuclear spaceCuratedAdd BLAST13
Transmembranei357 – 374HelicalSequence analysisAdd BLAST18
Topological domaini375 – 642NuclearBy similarityCuratedAdd BLAST268
Transmembranei643 – 663HelicalSequence analysisAdd BLAST21
Topological domaini664Perinuclear spaceCurated1

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane, Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003171991 – 664Transmembrane protein 201Add BLAST664

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei1N-acetylmethionineBy similarity1
Modified residuei441PhosphoserineBy similarity1
Modified residuei444PhosphoserineBy similarity1
Modified residuei450PhosphoserineBy similarity1
Modified residuei454PhosphoserineBy similarity1
Modified residuei466PhosphoserineBy similarity1
Modified residuei477PhosphoserineBy similarity1
Modified residuei480PhosphoserineBy similarity1
Modified residuei529PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		A2A8U2

MaxQB - The MaxQuant DataBase

More...MaxQBi		A2A8U2

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		A2A8U2

PeptideAtlas

More...PeptideAtlasi		A2A8U2

PRoteomics IDEntifications database

More...PRIDEi		A2A8U2

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		A2A8U2

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		A2A8U2

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSMUSG00000044700 Expressed in 233 organ(s), highest expression level in embryo

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		A2A8U2 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Isoform 2 interacts with EMD (By similarity). Isoform 3 interacts with SUN2 and LMNA (PubMed:22349700). May bind to Ran GTPase; has a greater affinity for Ran-GTP over Ran-GDP (By similarity).By similarity1 Publication

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

WithEntry#Exp.IntActNotes
Sun2Q8BJS43EBI-12591474,EBI-646914

GO - Molecular functioni

View the complete GO annotation on QuickGO ...

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...BioGridi		231056, 1 interactor

Protein interaction database and analysis system

More...IntActi		A2A8U2, 4 interactors

Molecular INTeraction database

More...MINTi		A2A8U2

STRING: functional protein association networks

More...STRINGi		10090.ENSMUSP00000050481

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi390 – 520Ser-richAdd BLAST131

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the TMEM201 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG4623 Eukaryota
ENOG41123RR LUCA

Ensembl GeneTree

More...GeneTreei		ENSGT00390000002713

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000154619

The HOVERGEN Database of Homologous Vertebrate Genes

More...HOVERGENi		HBG057857

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		A2A8U2

Identification of Orthologs from Complete Genome Data

More...OMAi		QSHQMGV

Database of Orthologous Groups

More...OrthoDBi		532133at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		A2A8U2

TreeFam database of animal gene trees

More...TreeFami		TF106107

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR018617 Ima1_N
IPR040041 TMEM201
IPR018861 TMEM201_C

The PANTHER Classification System

More...PANTHERi		PTHR28646 PTHR28646, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF10476 DUF2448, 1 hit
PF09779 Ima1_N, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: A2A8U2-1) [UniParc]FASTAAdd to basket
Also known as: Samp1c

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MEGVSALLAS CPTAGLAGGL GVTACAAAGV VLYRIARRVK PTHTMVNCWF 
        60         70         80         90        100
CNHDTLVPYG NRNCWDCPHC EQYNGFQENG DYNKPIPAQY MEHLNHVVSS 
       110        120        130        140        150
VPSPRDPAQP QQWVSSQVLL CRRCSHHQTT KIKQLAAFTP REEGRYDEEI 
       160        170        180        190        200
EVYRHHLEQM YKLCRPCQAA VEYYIKHQNR QLRALLLSHQ FRRREADQAH 
       210        220        230        240        250
GQSFSSSAVK APFQVILLRA LAFLACAFLL FTTLYGPSEP FTPGAALPPA 
       260        270        280        290        300
LPPGGNSSAA SDNTTSQAEG WQQLLGLLPE HATEKLHEAW AFGQSHQTSI 
       310        320        330        340        350
VAVGLLTCLL AMLLAGRIRL RRIDAFSTCL WALLLGLHLA EHYLQAASPG 
       360        370        380        390        400
WLDTLKFSTT SLCCLVGFTA AVATRKSTGP RRFRPRRYFS GDSASLFPSS 
       410        420        430        440        450
PSLAVPYPSV TSSPASLFIP TPPGFLPLTK QQLFRSPRRV SPSSLPGRLS 
       460        470        480        490        500
RALSLGTIPP LTRTDSGYLF SGSRPPSRVS PAGEVSLSDY FSLLSSSFPA 
       510        520        530        540        550
SPLPSPAPSV ASSVASSSGS LRHRRPLISP ARLNLKGQKL LLFSSPGEAP 
       560        570        580        590        600
NTPSSSEEFS PPNGSLFIES PQLPQRNHTR DTKHTMEMRS MLARDSARSS 
       610        620        630        640        650
HSIKKEDESS QSSTCVVDTT TKGCSEETTP WKARVSPSLV RGLLAVSLAV 
       660 
NALFTSAYLY QSLR
Length:664
Mass (Da):72,500
Last modified:February 20, 2007 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iFF1207C8C15B33C2
GO
Isoform 2 (identifier: A2A8U2-2) [UniParc]FASTAAdd to basket
Also known as: Samp1, Samp1a

The sequence of this isoform differs from the canonical sequence as follows:
     388-392: YFSGD → SEKQQ
     393-664: Missing.

Show »
Length:392
Mass (Da):43,549
Checksum:i054F1EB65DE10C25
GO
Isoform 3 (identifier: A2A8U2-3) [UniParc]FASTAAdd to basket
Also known as: Samp1b

The sequence of this isoform differs from the canonical sequence as follows:
     633-634: AR → GL
     635-664: Missing.

Show »
Length:634
Mass (Da):69,251
Checksum:i61A5102FA5DD600D
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti128Q → H in BAC37562 (PubMed:16141072).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_030917388 – 392YFSGD → SEKQQ in isoform 2. Curated5
Alternative sequenceiVSP_030918393 – 664Missing in isoform 2. CuratedAdd BLAST272
Alternative sequenceiVSP_030919633 – 634AR → GL in isoform 3. 1 Publication2
Alternative sequenceiVSP_030920635 – 664Missing in isoform 3. 1 PublicationAdd BLAST30

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AK079157 mRNA Translation: BAC37562.1
AK153631 mRNA Translation: BAE32126.1
AL626808 Genomic DNA No translation available.
BC072645 mRNA Translation: AAH72645.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS18965.1 [A2A8U2-2]
CCDS71523.1 [A2A8U2-1]

NCBI Reference Sequences

More...RefSeqi		NP_001271199.1, NM_001284270.1 [A2A8U2-1]
NP_001271202.1, NM_001284273.1
NP_808340.2, NM_177672.4 [A2A8U2-2]

UniGene gene-oriented nucleotide sequence clusters

More...UniGenei		Mm.266704

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENSMUST00000054459; ENSMUSP00000050481; ENSMUSG00000044700 [A2A8U2-3]
ENSMUST00000103208; ENSMUSP00000099497; ENSMUSG00000044700 [A2A8U2-2]
ENSMUST00000105687; ENSMUSP00000101312; ENSMUSG00000044700 [A2A8U2-1]

Database of genes from NCBI RefSeq genomes

More...GeneIDi		230917

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		mmu:230917

UCSC genome browser

More...UCSCi		uc008vwz.2 mouse [A2A8U2-1]
uc008vxa.3 mouse [A2A8U2-3]
uc008vxc.2 mouse [A2A8U2-2]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK079157 mRNA Translation: BAC37562.1
AK153631 mRNA Translation: BAE32126.1
AL626808 Genomic DNA No translation available.
BC072645 mRNA Translation: AAH72645.1
CCDSiCCDS18965.1 [A2A8U2-2]
CCDS71523.1 [A2A8U2-1]
RefSeqiNP_001271199.1, NM_001284270.1 [A2A8U2-1]
NP_001271202.1, NM_001284273.1
NP_808340.2, NM_177672.4 [A2A8U2-2]
UniGeneiMm.266704

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

Protein-protein interaction databases

BioGridi231056, 1 interactor
IntActiA2A8U2, 4 interactors
MINTiA2A8U2
STRINGi10090.ENSMUSP00000050481

PTM databases

iPTMnetiA2A8U2
PhosphoSitePlusiA2A8U2

Proteomic databases

jPOSTiA2A8U2
MaxQBiA2A8U2
PaxDbiA2A8U2
PeptideAtlasiA2A8U2
PRIDEiA2A8U2

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000054459; ENSMUSP00000050481; ENSMUSG00000044700 [A2A8U2-3]
ENSMUST00000103208; ENSMUSP00000099497; ENSMUSG00000044700 [A2A8U2-2]
ENSMUST00000105687; ENSMUSP00000101312; ENSMUSG00000044700 [A2A8U2-1]
GeneIDi230917
KEGGimmu:230917
UCSCiuc008vwz.2 mouse [A2A8U2-1]
uc008vxa.3 mouse [A2A8U2-3]
uc008vxc.2 mouse [A2A8U2-2]

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		199953
MGIiMGI:1196277 Tmem201

Phylogenomic databases

eggNOGiKOG4623 Eukaryota
ENOG41123RR LUCA
GeneTreeiENSGT00390000002713
HOGENOMiHOG000154619
HOVERGENiHBG057857
InParanoidiA2A8U2
OMAiQSHQMGV
OrthoDBi532133at2759
PhylomeDBiA2A8U2
TreeFamiTF106107

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		Tmem201 mouse

Protein Ontology

More...PROi		PR:A2A8U2

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSMUSG00000044700 Expressed in 233 organ(s), highest expression level in embryo
GenevisibleiA2A8U2 MM

Family and domain databases

InterProiView protein in InterPro
IPR018617 Ima1_N
IPR040041 TMEM201
IPR018861 TMEM201_C
PANTHERiPTHR28646 PTHR28646, 1 hit
PfamiView protein in Pfam
PF10476 DUF2448, 1 hit
PF09779 Ima1_N, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiTM201_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A2A8U2
Secondary accession number(s): Q3U5F3, Q6GQS9, Q8BNY3
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: February 20, 2007
Last modified: February 13, 2019
This is version 87 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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