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UniProtKB - A2A891 (CMTA1_MOUSE)

Entry version 98 (07 Oct 2020)
Sequence version 1 (05 Feb 2008)
Previous versions | rss
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Protein

Calmodulin-binding transcription activator 1

Gene

Camta1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Transcriptional activator.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section specifies the position and type of each DNA-binding domain present within the protein.<p><a href='/help/dna_bind' target='_top'>More...</a></p>DNA bindingi63 – 188CG-1PROSITE-ProRule annotationAdd BLAST126

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionActivator
Biological processTranscription, Transcription regulation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Calmodulin-binding transcription activator 1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Camta1Imported
Synonyms:Kiaa0833Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 4

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...MGIi		MGI:2140230, Camta1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003550431 – 1682Calmodulin-binding transcription activator 1Add BLAST1682

Proteomic databases

MaxQB - The MaxQuant DataBase

More...MaxQBi		A2A891

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		A2A891

PRoteomics IDEntifications database

More...PRIDEi		A2A891

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		A2A891

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		A2A891

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSMUSG00000014592, Expressed in cerebellum and 253 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		A2A891, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		A2A891, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

May interact with calmodulin.

By similarity

Protein-protein interaction databases

Protein interaction database and analysis system

More...IntActi		A2A891, 1 interactor

STRING: functional protein association networks

More...STRINGi		10090.ENSMUSP00000054804

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		A2A891, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		A2A891

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini875 – 955IPT/TIGAdd BLAST81
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati1066 – 1095ANK 1Sequence analysisAdd BLAST30
Repeati1111 – 1141ANK 2Sequence analysisAdd BLAST31
Repeati1145 – 1174ANK 3Sequence analysisAdd BLAST30
Domaini1549 – 1585IQ 1PROSITE-ProRule annotationAdd BLAST37
Domaini1586 – 1608IQ 2PROSITE-ProRule annotationAdd BLAST23
Domaini1609 – 1631IQ 3PROSITE-ProRule annotationAdd BLAST23

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a short (usually not more than 20 amino acids) conserved sequence motif of biological significance.<p><a href='/help/motif' target='_top'>More...</a></p>Motifi112 – 119Nuclear localization signalPROSITE-ProRule annotationBy similarity8

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1006 – 1033Gly-richSequence analysisAdd BLAST28

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the CAMTA family.Sequence analysis

Keywords - Domaini

ANK repeat, Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG0520, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT00940000155203

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_003170_1_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		A2A891

KEGG Orthology (KO)

More...KOi		K21596

Identification of Orthologs from Complete Genome Data

More...OMAi		CSPQQGG

Database of Orthologous Groups

More...OrthoDBi		315169at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		A2A891

TreeFam database of animal gene trees

More...TreeFami		TF323452

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		1.25.40.20, 1 hit
2.60.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR002110, Ankyrin_rpt
IPR020683, Ankyrin_rpt-contain_dom
IPR036770, Ankyrin_rpt-contain_sf
IPR039033, Camta1
IPR005559, CG-1_dom
IPR013783, Ig-like_fold
IPR014756, Ig_E-set
IPR002909, IPT_dom
IPR000048, IQ_motif_EF-hand-BS

The PANTHER Classification System

More...PANTHERi		PTHR23335:SF11, PTHR23335:SF11, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF03859, CG-1, 1 hit
PF01833, TIG, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM01076, CG-1, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF48403, SSF48403, 1 hit
SSF81296, SSF81296, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50297, ANK_REP_REGION, 1 hit
PS50088, ANK_REPEAT, 1 hit
PS51437, CG_1, 1 hit
PS50096, IQ, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (5+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 5 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 5 described isoforms and 3 potential isoforms that are computationally mapped.Show allAlign All

Isoform 11 Publication (identifier: A2A891-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MWRAEGKWLP KTSRKSVSQS VFCGTSTYCV LNTVPPIEDD HGNSNSSHVK 
        60         70         80         90        100
IFLPKKLLEC LPKCSSLPKE RHRWNTNEEI AAYLITFEKH EEWLTTSPKT 
       110        120        130        140        150
RPQNGSMILY NRKKVKYRKD GYCWKKRKDG KTTREDHMKL KVQGVECLYG 
       160        170        180        190        200
CYVHSSIIPT FHRRCYWLLQ NPDIVLVHYL NVPAIEDCGK PCGPILCSIN 
       210        220        230        240        250
TDKKEWAKWT KEELIGQLKP MFHGIKWTCS NGNSSSGFSV EQLVQQILDS 
       260        270        280        290        300
HQTKPQPRTH NCLCTGSLGA GSSVHHKCNS AKHRIISPKV EPRAGGYGGH 
       310        320        330        340        350
SEVQHNDVSE GKHEPSHGRS TSREKRNGKV AKPALLHQNS TEVSSTNQVE 
       360        370        380        390        400
VPDTTQSSPV SISSGLNSDP DMVDSPVVTG VSSMAVASVM GGLSQSATVF 
       410        420        430        440        450
MSEVTNEAVY TMSPTAGPNH HLLSPDASQG LVLAVSSDGH KFAFPTTGSS 
       460        470        480        490        500
DSLSMLPANV SEELVLSTTL DGGRKIPETA MNFDPDCFLN NPKQGQTYGG 
       510        520        530        540        550
GGLKAEMVST NIRHSPPAER SFGFTSVLTK EIKTEDTSFE QQMAKEAAYS 
       560        570        580        590        600
SSAAAAASSS LTLTAAGSSL LPSGGGLSPS TTLEQMDFSA IDSNKDYASS 
       610        620        630        640        650
FSQTGHSPHI HQTPSPSFFL QDASKPLPLE QNTHSSLSES GAAFVMPTVK 
       660        670        680        690        700
TEASSQTSSC SGHVETRIES TSSLHLMQFQ ANFQAMAAEG EVTMETSQAA 
       710        720        730        740        750
EGNEVLLKSG ELQACGSEHY LQPETNGVIR SAGGVPLLPS NVVQGLYPVA 
       760        770        780        790        800
QPSLGNSSNM ELSLDHFDIS FSNQFSDLIN DFISVEGGSG TIYGHQLVSG 
       810        820        830        840        850
DSAALSQSED GARAPFTQAE MCIPCCSPQQ GSLQLSSAEG GPSTMAYMHV 
       860        870        880        890        900
AEVVSAASAQ GALGMLQQSG RVFMVTDYSP EWSYPEGGVK VLITGPWQEA 
       910        920        930        940        950
SNNYSCLFDQ ISVPASLIQP GVLRCYCPAH DTGLVTLQVA FNNQIISNSV 
       960        970        980        990       1000
VFEYKARALP TLPSSQHDWL SLDDNQFRMS ILERLEQMER RMAEMTGSQQ 
      1010       1020       1030       1040       1050
HKQASGGGGS GSGSGSGAGG GQAQCASGAG TLGSCFESRV VVVCEKMMSR 
      1060       1070       1080       1090       1100
ACWAKSKHLI HSKTFRGMTL LHLAAAQGYA TLIQTLIKWR TKHADSIDLE 
      1110       1120       1130       1140       1150
LEVDPLNVDH FSCTPLMWAC ALGHLEAAVV LYKWDRRAIS IPDSLGRLPL 
      1160       1170       1180       1190       1200
GIARSRGHVK LAECLEHLQR DEQAQLGQAS RIHCAPSEEP TTDSWMAQWQ 
      1210       1220       1230       1240       1250
REAMSPPEIP KGVTVIASTN PELRRPRSEP SNYYSTEGHK DYPAPKKHKL 
      1260       1270       1280       1290       1300
NPESFQARQE KLLCTALSLE QPNIRKQSPR SKQPSPETIS PSEGVREYSR 
      1310       1320       1330       1340       1350
EAAPPTPETA ASQASASQPV VKWSAKDLYI GVSTVQVTGN PKGTSVVKDA 
      1360       1370       1380       1390       1400
APSQVRPREP MSVLMLANRE VVNTEMGAYR DRTEHEDCPQ PMDDIQVNMM 
      1410       1420       1430       1440       1450
TLAEHIIEAT PDRIKQENFV PMESSALERT DPATISSTMS WLASYLADAD 
      1460       1470       1480       1490       1500
RLPSAAHIRS AYTEPLTPSS NASLSPAGSP VSEVAFEKPS LPSAADWSEF 
      1510       1520       1530       1540       1550
LSASTSEKVE SELAQLTLSD HEQRELYEAA RLVQTAFRKY KGRPLREQQE 
      1560       1570       1580       1590       1600
VAAAVIQRCY RKYKQLTWIA LKYALYKKMT QAAILIQSKF RSYYEQKRFQ 
      1610       1620       1630       1640       1650
QSRRAAVLIQ NFYRSYKKCG RRRPARRTAV IVQQKLRSSL LTKKQDQAAR 
      1660       1670       1680 
KIMRFLRRCR HSPLVDHRLY KRSERIEKGQ GT
Length:1,682
Mass (Da):184,319
Last modified:February 5, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3F96253C6CF119C6
GO
Isoform 2 (identifier: A2A891-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1566-1572: Missing.

Show »
Length:1,675
Mass (Da):183,493
Checksum:iC811D17DE9DB7D26
GO
Isoform 3 (identifier: A2A891-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-978: Missing.
     1222-1334: Missing.

Show »
Length:591
Mass (Da):66,116
Checksum:i18DEB1C54B8316DB
GO
Isoform 4 (identifier: A2A891-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-978: Missing.
     1222-1334: Missing.
     1566-1572: Missing.
     1662-1682: SPLVDHRLYKRSERIEKGQGT → RVKELKKAKELEDIQQHPLAM

Show »
Length:584
Mass (Da):65,325
Checksum:iD71B213119E7D3BF
GO
Isoform 5 (identifier: A2A891-5) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1459-1472: Missing.
     1566-1572: Missing.
     1662-1682: SPLVDHRLYKRSERIEKGQGT → RVKELKKAKELEDIQQHPLAM

Show »
Length:1,661
Mass (Da):182,052
Checksum:i42F3C95AD83F2CC1
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
B0QZL6B0QZL6_MOUSE
Calmodulin-binding transcription ac...
Camta1
75Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
Z4YMK8Z4YMK8_MOUSE
Calmodulin-binding transcription ac...
Camta1
238Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
Q3TYE0Q3TYE0_MOUSE
Calmodulin-binding transcription ac...
Camta1
80Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence CAM24788 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti1394D → G in CAQ51627 (PubMed:19468303).Curated1
Sequence conflicti1394D → G in CAQ51628 (PubMed:19468303).Curated1
Sequence conflicti1394D → G in CAQ51883 (PubMed:19468303).Curated1
Sequence conflicti1394D → G in CAQ51884 (PubMed:19468303).Curated1
Sequence conflicti1482S → N in CAQ51627 (PubMed:19468303).Curated1
Sequence conflicti1482S → N in CAQ51628 (PubMed:19468303).Curated1
Sequence conflicti1482S → N in CAQ51883 (PubMed:19468303).Curated1
Sequence conflicti1482S → N in CAQ51884 (PubMed:19468303).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0529871 – 978Missing in isoform 3 and isoform 4. CuratedAdd BLAST978
Alternative sequenceiVSP_0529881222 – 1334Missing in isoform 3 and isoform 4. CuratedAdd BLAST113
Alternative sequenceiVSP_0529891459 – 1472Missing in isoform 5. CuratedAdd BLAST14
Alternative sequenceiVSP_0529901566 – 1572Missing in isoform 2, isoform 4 and isoform 5. Curated7
Alternative sequenceiVSP_0529911662 – 1682SPLVD…KGQGT → RVKELKKAKELEDIQQHPLA M in isoform 4 and isoform 5. CuratedAdd BLAST21

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AL606986 AL732550 Genomic DNA Translation: CAM18834.1
AL606986 AL732550 Genomic DNA Translation: CAM18835.1
AL606967 AL732550 Genomic DNA Translation: CAM20269.1
AL606967 AL732550 Genomic DNA Translation: CAM20270.1
AL732550 AL611931 Genomic DNA Translation: CAM24365.1
AL732550 AL611931 Genomic DNA Translation: CAM24366.1
AL607143 AL732550 Genomic DNA Translation: CAM24783.1
AL607143 AL732550 Genomic DNA Translation: CAM24784.1
AL607143 Genomic DNA Translation: CAM24788.2 Sequence problems.
AL607143 Genomic DNA Translation: CAM24789.1
AL607143 Genomic DNA Translation: CAM24790.1
AL611931 AL732550 Genomic DNA Translation: CAM25054.1
AL611931 AL732550 Genomic DNA Translation: CAM25055.1
CU442759, CU207342, CU407306 Genomic DNA Translation: CAQ51627.1
CU442759, CU207342, CU407306 Genomic DNA Translation: CAQ51628.1
CU407306, CU207342, CU442759 Genomic DNA Translation: CAQ51883.1
CU407306, CU207342, CU442759 Genomic DNA Translation: CAQ51884.1
AK122383 mRNA Translation: BAC65665.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS38981.1 [A2A891-1]

NCBI Reference Sequences

More...RefSeqi		NP_001075026.1, NM_001081557.3 [A2A891-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENSMUST00000049790; ENSMUSP00000054804; ENSMUSG00000014592 [A2A891-1]
ENSMUST00000097774; ENSMUSP00000095381; ENSMUSG00000014592 [A2A891-2]
ENSMUST00000105668; ENSMUSP00000101293; ENSMUSG00000014592 [A2A891-3]
ENSMUST00000105670; ENSMUSP00000101295; ENSMUSG00000014592 [A2A891-4]
ENSMUST00000169423; ENSMUSP00000127916; ENSMUSG00000014592 [A2A891-1]

Database of genes from NCBI RefSeq genomes

More...GeneIDi		100072

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		mmu:100072

UCSC genome browser

More...UCSCi		uc008vyk.2, mouse [A2A891-4]
uc008vym.2, mouse [A2A891-3]
uc008vyn.2, mouse [A2A891-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL606986 AL732550 Genomic DNA Translation: CAM18834.1
AL606986 AL732550 Genomic DNA Translation: CAM18835.1
AL606967 AL732550 Genomic DNA Translation: CAM20269.1
AL606967 AL732550 Genomic DNA Translation: CAM20270.1
AL732550 AL611931 Genomic DNA Translation: CAM24365.1
AL732550 AL611931 Genomic DNA Translation: CAM24366.1
AL607143 AL732550 Genomic DNA Translation: CAM24783.1
AL607143 AL732550 Genomic DNA Translation: CAM24784.1
AL607143 Genomic DNA Translation: CAM24788.2 Sequence problems.
AL607143 Genomic DNA Translation: CAM24789.1
AL607143 Genomic DNA Translation: CAM24790.1
AL611931 AL732550 Genomic DNA Translation: CAM25054.1
AL611931 AL732550 Genomic DNA Translation: CAM25055.1
CU442759, CU207342, CU407306 Genomic DNA Translation: CAQ51627.1
CU442759, CU207342, CU407306 Genomic DNA Translation: CAQ51628.1
CU407306, CU207342, CU442759 Genomic DNA Translation: CAQ51883.1
CU407306, CU207342, CU442759 Genomic DNA Translation: CAQ51884.1
AK122383 mRNA Translation: BAC65665.1
CCDSiCCDS38981.1 [A2A891-1]
RefSeqiNP_001075026.1, NM_001081557.3 [A2A891-1]

3D structure databases

SMRiA2A891
ModBaseiSearch...

Protein-protein interaction databases

IntActiA2A891, 1 interactor
STRINGi10090.ENSMUSP00000054804

PTM databases

iPTMnetiA2A891
PhosphoSitePlusiA2A891

Proteomic databases

MaxQBiA2A891
PaxDbiA2A891
PRIDEiA2A891

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...Antibodypediai		49059, 56 antibodies

Genome annotation databases

EnsembliENSMUST00000049790; ENSMUSP00000054804; ENSMUSG00000014592 [A2A891-1]
ENSMUST00000097774; ENSMUSP00000095381; ENSMUSG00000014592 [A2A891-2]
ENSMUST00000105668; ENSMUSP00000101293; ENSMUSG00000014592 [A2A891-3]
ENSMUST00000105670; ENSMUSP00000101295; ENSMUSG00000014592 [A2A891-4]
ENSMUST00000169423; ENSMUSP00000127916; ENSMUSG00000014592 [A2A891-1]
GeneIDi100072
KEGGimmu:100072
UCSCiuc008vyk.2, mouse [A2A891-4]
uc008vym.2, mouse [A2A891-3]
uc008vyn.2, mouse [A2A891-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		23261
MGIiMGI:2140230, Camta1

Rodent Unidentified Gene-Encoded large proteins database

More...Rougei		Search...

Phylogenomic databases

eggNOGiKOG0520, Eukaryota
GeneTreeiENSGT00940000155203
HOGENOMiCLU_003170_1_0_1
InParanoidiA2A891
KOiK21596
OMAiCSPQQGG
OrthoDBi315169at2759
PhylomeDBiA2A891
TreeFamiTF323452

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...BioGRID-ORCSi		100072, 1 hit in 19 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		Camta1, mouse

Protein Ontology

More...PROi		PR:A2A891
RNActiA2A891, protein

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSMUSG00000014592, Expressed in cerebellum and 253 other tissues
ExpressionAtlasiA2A891, baseline and differential
GenevisibleiA2A891, MM

Family and domain databases

Gene3Di1.25.40.20, 1 hit
2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR002110, Ankyrin_rpt
IPR020683, Ankyrin_rpt-contain_dom
IPR036770, Ankyrin_rpt-contain_sf
IPR039033, Camta1
IPR005559, CG-1_dom
IPR013783, Ig-like_fold
IPR014756, Ig_E-set
IPR002909, IPT_dom
IPR000048, IQ_motif_EF-hand-BS
PANTHERiPTHR23335:SF11, PTHR23335:SF11, 1 hit
PfamiView protein in Pfam
PF03859, CG-1, 1 hit
PF01833, TIG, 1 hit
SMARTiView protein in SMART
SM01076, CG-1, 1 hit
SUPFAMiSSF48403, SSF48403, 1 hit
SSF81296, SSF81296, 1 hit
PROSITEiView protein in PROSITE
PS50297, ANK_REP_REGION, 1 hit
PS50088, ANK_REPEAT, 1 hit
PS51437, CG_1, 1 hit
PS50096, IQ, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCMTA1_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A2A891
Secondary accession number(s): A2A892
, A2A896, A2A897, A2A898, B2KGR3, B2KGR4, Q80TQ8
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 25, 2008
Last sequence update: February 5, 2008
Last modified: October 7, 2020
This is version 98 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
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