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Protein
Submitted name:

Zinc finger, MYND-type-containing 8

Gene

Zmynd8

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger, MYND-type-containing 8Imported
Gene namesi
Name:Zmynd8Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1918025 Zmynd8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiA2A485
PeptideAtlasiA2A485
PRIDEiA2A485

Expressioni

Gene expression databases

BgeeiENSMUSG00000039671
ExpressionAtlasiA2A485 baseline and differential

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliA2A485
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini83 – 128PHD-typeInterPro annotationAdd BLAST46
Domaini160 – 230BromoInterPro annotationAdd BLAST71
Domaini272 – 322PWWPInterPro annotationAdd BLAST51
Domaini983 – 1017MYND-typeInterPro annotationAdd BLAST35

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili512 – 532Sequence analysisAdd BLAST21
Coiled coili915 – 979Sequence analysisAdd BLAST65

Keywords - Domaini

BromodomainPROSITE-ProRule annotation, Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410ITRI Eukaryota
ENOG410XSDA LUCA
GeneTreeiENSGT00910000144099
HOGENOMiHOG000230951
HOVERGENiHBG031823

Family and domain databases

CDDicd05508 Bromo_RACK7, 1 hit
cd05841 BS69_related, 1 hit
Gene3Di1.20.920.10, 1 hit
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001487 Bromodomain
IPR036427 Bromodomain-like_sf
IPR000313 PWWP_dom
IPR037967 RACK7_Bromo_dom
IPR019786 Zinc_finger_PHD-type_CS
IPR021931 ZMYND8
IPR035505 ZMYND8/11_PWWP
IPR011011 Znf_FYVE_PHD
IPR002893 Znf_MYND
IPR001965 Znf_PHD
IPR019787 Znf_PHD-finger
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF00439 Bromodomain, 1 hit
PF12064 DUF3544, 1 hit
PF00855 PWWP, 1 hit
PRINTSiPR00503 BROMODOMAIN
SMARTiView protein in SMART
SM00297 BROMO, 1 hit
SM00249 PHD, 1 hit
SM00293 PWWP, 1 hit
SUPFAMiSSF47370 SSF47370, 1 hit
SSF57903 SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS50014 BROMODOMAIN_2, 1 hit
PS50812 PWWP, 1 hit
PS01360 ZF_MYND_1, 1 hit
PS50865 ZF_MYND_2, 1 hit
PS01359 ZF_PHD_1, 1 hit
PS50016 ZF_PHD_2, 1 hit

Sequencei

Sequence statusi: Complete.

A2A485-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHPQSLAEEE IKTEQEVVEG MDISTRSKDP VSTEKTAPKR RFPSPPHSSN
60 70 80 90 100
GHSPQDSSTS PIKKKKKPGL LNSSNKEQDG RNDFYCWVCH REGQVLCCEL
110 120 130 140 150
CPRVYHAKCL RLTSEPEGDW FCPECEKITV AECIETQSKA MTMLTIEQLS
160 170 180 190 200
YLLKFAIQKM KQPGTDAFQK PVPLEQHPDY AEYIFHPMDL CTLEKNAKKK
210 220 230 240 250
MYGCTEAFLA DAKWILHNCI IYNGGNHKLT QIAKVVIKIC EHEMNEIEVC
260 270 280 290 300
PECYLAACQK RDNWFCEPCS NPHPLVWAKL KGFPFWPAKA LRDKDGQVDA
310 320 330 340 350
RFFGQHDRAW VPVNNCYLMS KEIPFSVKKT KSIFNSAMQE MEVYVENIRR
360 370 380 390 400
KFGVFNYSPF RTPYTPNNQY QMLLDPSNPS AGTAKTDKQE KVKLNFDMTA
410 420 430 440 450
SPKILLSKPL LSGGAGRRIS LSDMPRSPTS TNSSVHTGSD VEQDPEKKAP
460 470 480 490 500
SSHFSASEES MDFLDKSTAS PASTKTGQAG SLSGSPKPFS PQAPTPIMTK
510 520 530 540 550
PDKTSTSTTG SILNLNLDRS KAEMDLKELS ESVQQQSAPV PLISPKRQIR
560 570 580 590 600
SRFQLNLDKT IESCKAQLGI NEISEDVYTA VEHSDSEDSE KSESSDSEYV
610 620 630 640 650
SDEEQKPKNE PEDPEDKEGS RVDKEAPAIK RKPKPTNQVE VKEEAKSNSP
660 670 680 690 700
VSEKPDPTPA KDKASPEPEK DFVEKAKPSP HPTKDKLKGK DETDSPTVHL
710 720 730 740 750
GLDSDSESEL VIDLGEDPSG REGRKNKKDP KVPSPKQDAI GKPPPSSTSA
760 770 780 790 800
GNQSPPETPV LTRSATQAPA AGVTVAAATT STMSTVTVTA PATAVTGSPV
810 820 830 840 850
KKQRPLLPKE TVPAVQRVVW NASTVQQKEV TQSPSTSTIT LVTSTQPAAL
860 870 880 890 900
VSSSGSASTL ASAINADLPI ATASADVAAD IAKYTSKMMD AIKGTMTEIY
910 920 930 940 950
NDLSKNTTGS TIAEIRRLRI EIEKLQWLHQ QELAEMKHNL ELTMAEMRQS
960 970 980 990 1000
LEQERDRLIA EVKKQLELEK QQAVDETKKK QWCANCKKEA IFYCCWNTSY
1010 1020 1030 1040 1050
CDYPCQQAHW PEHMKSCTQS ATAPQQEADA EASTETGNKS SQGNSSNTQS
1060 1070 1080 1090
APSEPASAPK EKEAPAEKSK DSNPGSFRLQ RDALLYALRL QSKL
Length:1,094
Mass (Da):120,841
Last modified:February 20, 2007 - v1
Checksum:i935A7BB6F9F315DA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL589902 Genomic DNA No translation available.
AL591712 Genomic DNA No translation available.
AL928840 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000088113; ENSMUSP00000085436; ENSMUSG00000039671

Similar proteinsi

Entry informationi

Entry nameiA2A485_MOUSE
AccessioniPrimary (citable) accession number: A2A485
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: July 18, 2018
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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