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Protein
Submitted name:

Zinc finger, MYND-type-containing 8

Gene

Zmynd8

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger, MYND-type-containing 8Imported
Gene namesi
Name:Zmynd8Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1918025 Zmynd8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiA2A484
PeptideAtlasiA2A484
PRIDEiA2A484

Expressioni

Gene expression databases

BgeeiENSMUSG00000039671
ExpressionAtlasiA2A484 baseline and differential

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliA2A484
SMRiA2A484
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini92 – 137PHD-typeInterPro annotationAdd BLAST46
Domaini169 – 239BromoInterPro annotationAdd BLAST71
Domaini281 – 331PWWPInterPro annotationAdd BLAST51
Domaini1044 – 1078MYND-typeInterPro annotationAdd BLAST35

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili521 – 541Sequence analysisAdd BLAST21
Coiled coili844 – 867Sequence analysisAdd BLAST24
Coiled coili976 – 1040Sequence analysisAdd BLAST65

Keywords - Domaini

BromodomainPROSITE-ProRule annotation, Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410ITRI Eukaryota
ENOG410XSDA LUCA
GeneTreeiENSGT00910000144099
HOVERGENiHBG031823
InParanoidiA2A484
OMAiSSKSSCW
OrthoDBiEOG091G0B2W
PhylomeDBiA2A484
TreeFamiTF317221

Family and domain databases

CDDicd05508 Bromo_RACK7, 1 hit
cd05841 BS69_related, 1 hit
Gene3Di1.20.920.10, 1 hit
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001487 Bromodomain
IPR036427 Bromodomain-like_sf
IPR000313 PWWP_dom
IPR037967 RACK7_Bromo_dom
IPR019786 Zinc_finger_PHD-type_CS
IPR021931 ZMYND8
IPR035505 ZMYND8/11_PWWP
IPR011011 Znf_FYVE_PHD
IPR002893 Znf_MYND
IPR001965 Znf_PHD
IPR019787 Znf_PHD-finger
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF00439 Bromodomain, 1 hit
PF12064 DUF3544, 1 hit
PF00855 PWWP, 1 hit
SMARTiView protein in SMART
SM00297 BROMO, 1 hit
SM00249 PHD, 1 hit
SM00293 PWWP, 1 hit
SUPFAMiSSF47370 SSF47370, 1 hit
SSF57903 SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS50014 BROMODOMAIN_2, 1 hit
PS50812 PWWP, 1 hit
PS01360 ZF_MYND_1, 1 hit
PS50865 ZF_MYND_2, 1 hit
PS01359 ZF_PHD_1, 1 hit
PS50016 ZF_PHD_2, 1 hit

Sequencei

Sequence statusi: Complete.

A2A484-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDISTRSKEP KEDPVSTEKT APKRRFPSPP HSSNGHSPQD SSTSPIKKKK
60 70 80 90 100
KPGLLNSSNK EQSELRHGPF YYMKQPLTTD PVDVVPQDGR NDFYCWVCHR
110 120 130 140 150
EGQVLCCELC PRVYHAKCLR LTSEPEGDWF CPECEKITVA ECIETQSKAM
160 170 180 190 200
TMLTIEQLSY LLKFAIQKMK QPGTDAFQKP VPLEQHPDYA EYIFHPMDLC
210 220 230 240 250
TLEKNAKKKM YGCTEAFLAD AKWILHNCII YNGGNHKLTQ IAKVVIKICE
260 270 280 290 300
HEMNEIEVCP ECYLAACQKR DNWFCEPCSN PHPLVWAKLK GFPFWPAKAL
310 320 330 340 350
RDKDGQVDAR FFGQHDRAWV PVNNCYLMSK EIPFSVKKTK SIFNSAMQEM
360 370 380 390 400
EVYVENIRRK FGVFNYSPFR TPYTPNNQYQ MLLDPSNPSA GTAKTDKQEK
410 420 430 440 450
VKLNFDMTAS PKILLSKPLL SGGAGRRISL SDMPRSPTST NSSVHTGSDV
460 470 480 490 500
EQDPEKKAPS SHFSASEESM DFLDKSTASP ASTKTGQAGS LSGSPKPFSP
510 520 530 540 550
QAPTPIMTKP DKTSTSTTGS ILNLNLDRSK AEMDLKELSE SVQQQSAPVP
560 570 580 590 600
LISPKRQIRS RFQLNLDKTI ESCKAQLGIN EISEDVYTAV EHSDSEDSEK
610 620 630 640 650
SESSDSEYVS DEEQKPKNEP EDPEDKEGSR VDKEAPAIKR KPKPTNQVEV
660 670 680 690 700
KEEAKSNSPV SEKPDPTPAK DKASPEPEKD FVEKAKPSPH PTKDKLKGKD
710 720 730 740 750
ETDSPTVHLG LDSDSESELV IDLGEDPSGR EGRKNKKDPK VPSPKQDAIG
760 770 780 790 800
KPPPSSTSAG NQSPPETPVL TRSATQAPAA GVTVAAATTS TMSTVTVTAP
810 820 830 840 850
ATAVTGSPVK KQRPLLPKET VPAVQRVVWN ASSKFQTSSQ KWHMQKIQRQ
860 870 880 890 900
QQQQQQQQQS QQQSQQQQPQ SSQGTRYQTR QAVKAVQQKE VTQSPSTSTI
910 920 930 940 950
TLVTSTQPAA LVSSSGSAST LASAINADLP IATASADVAA DIAKYTSKMM
960 970 980 990 1000
DAIKGTMTEI YNDLSKNTTG STIAEIRRLR IEIEKLQWLH QQELAEMKHN
1010 1020 1030 1040 1050
LELTMAEMRQ SLEQERDRLI AEVKKQLELE KQQAVDETKK KQWCANCKKE
1060 1070 1080 1090 1100
AIFYCCWNTS YCDYPCQQAH WPEHMKSCTQ SATAPQQEAD AEASTETGNK
1110 1120 1130 1140 1150
SSQGNSSNTQ SAPSEPASAP KEKEAPAEKS KDSSNSTLDL SGSRETPSSM
1160 1170 1180 1190 1200
LLGSNQSSVS KRCDKQPAYT PTTTDHQPHP NYPAQKYHSR SSKAGLWSSS
1210 1220 1230
EEKRASSRSE HSGGTSTKNL MPKESRESRL DAFWD
Length:1,235
Mass (Da):136,943
Last modified:February 20, 2007 - v1
Checksum:i4F73256E87522FEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL589902 Genomic DNA No translation available.
AL591712 Genomic DNA No translation available.
AL928840 Genomic DNA No translation available.
RefSeqiNP_001278087.1, NM_001291158.1
XP_006499454.1, XM_006499391.2
XP_011237808.1, XM_011239506.2
XP_011237809.1, XM_011239507.1
XP_011237810.1, XM_011239508.2
XP_011237811.1, XM_011239509.2
UniGeneiMm.227598

Genome annotation databases

EnsembliENSMUST00000109269; ENSMUSP00000104892; ENSMUSG00000039671
GeneIDi228880
UCSCiuc008nyb.3 mouse

Similar proteinsi

Entry informationi

Entry nameiA2A484_MOUSE
AccessioniPrimary (citable) accession number: A2A484
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: July 18, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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