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Protein
Submitted name:

Zinc finger, MYND-type-containing 8

Gene

Zmynd8

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger, MYND-type-containing 8Imported
Gene namesi
Name:Zmynd8Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1918025 Zmynd8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiA2A482
PeptideAtlasiA2A482
PRIDEiA2A482

Expressioni

Gene expression databases

BgeeiENSMUSG00000039671
ExpressionAtlasiA2A482 baseline and differential

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliA2A482
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini63 – 108PHD-typeInterPro annotationAdd BLAST46
Domaini140 – 210BromoInterPro annotationAdd BLAST71
Domaini252 – 302PWWPInterPro annotationAdd BLAST51
Domaini1015 – 1049MYND-typeInterPro annotationAdd BLAST35

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili492 – 512Sequence analysisAdd BLAST21
Coiled coili815 – 838Sequence analysisAdd BLAST24
Coiled coili947 – 1011Sequence analysisAdd BLAST65

Keywords - Domaini

BromodomainPROSITE-ProRule annotation, Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00910000144099
HOGENOMiHOG000230951
HOVERGENiHBG031823

Family and domain databases

CDDicd05508 Bromo_RACK7, 1 hit
cd05841 BS69_related, 1 hit
Gene3Di1.20.920.10, 1 hit
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001487 Bromodomain
IPR036427 Bromodomain-like_sf
IPR000313 PWWP_dom
IPR037967 RACK7_Bromo_dom
IPR019786 Zinc_finger_PHD-type_CS
IPR021931 ZMYND8
IPR035505 ZMYND8/11_PWWP
IPR011011 Znf_FYVE_PHD
IPR002893 Znf_MYND
IPR001965 Znf_PHD
IPR019787 Znf_PHD-finger
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF00439 Bromodomain, 1 hit
PF12064 DUF3544, 1 hit
PF00855 PWWP, 1 hit
SMARTiView protein in SMART
SM00297 BROMO, 1 hit
SM00249 PHD, 1 hit
SM00293 PWWP, 1 hit
SUPFAMiSSF47370 SSF47370, 1 hit
SSF57903 SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS50014 BROMODOMAIN_2, 1 hit
PS50812 PWWP, 1 hit
PS01360 ZF_MYND_1, 1 hit
PS50865 ZF_MYND_2, 1 hit
PS01359 ZF_PHD_1, 1 hit
PS50016 ZF_PHD_2, 1 hit

Sequencei

Sequence statusi: Complete.

A2A482-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDISTRSKDP VSTEKTAPKR RFPSPPHSSN GHSPQDSSTS PIKKKKKPGL
60 70 80 90 100
LNSSNKEQDG RNDFYCWVCH REGQVLCCEL CPRVYHAKCL RLTSEPEGDW
110 120 130 140 150
FCPECEKITV AECIETQSKA MTMLTIEQLS YLLKFAIQKM KQPGTDAFQK
160 170 180 190 200
PVPLEQHPDY AEYIFHPMDL CTLEKNAKKK MYGCTEAFLA DAKWILHNCI
210 220 230 240 250
IYNGGNHKLT QIAKVVIKIC EHEMNEIEVC PECYLAACQK RDNWFCEPCS
260 270 280 290 300
NPHPLVWAKL KGFPFWPAKA LRDKDGQVDA RFFGQHDRAW VPVNNCYLMS
310 320 330 340 350
KEIPFSVKKT KSIFNSAMQE MEVYVENIRR KFGVFNYSPF RTPYTPNNQY
360 370 380 390 400
QMLLDPSNPS AGTAKTDKQE KVKLNFDMTA SPKILLSKPL LSGGAGRRIS
410 420 430 440 450
LSDMPRSPTS TNSSVHTGSD VEQDPEKKAP SSHFSASEES MDFLDKSTAS
460 470 480 490 500
PASTKTGQAG SLSGSPKPFS PQAPTPIMTK PDKTSTSTTG SILNLNLDRS
510 520 530 540 550
KAEMDLKELS ESVQQQSAPV PLISPKRQIR SRFQLNLDKT IESCKAQLGI
560 570 580 590 600
NEISEDVYTA VEHSDSEDSE KSESSDSEYV SDEEQKPKNE PEDPEDKEGS
610 620 630 640 650
RVDKEAPAIK RKPKPTNQVE VKEEAKSNSP VSEKPDPTPA KDKASPEPEK
660 670 680 690 700
DFVEKAKPSP HPTKDKLKGK DETDSPTVHL GLDSDSESEL VIDLGEDPSG
710 720 730 740 750
REGRKNKKDP KVPSPKQDAI GKPPPSSTSA GNQSPPETPV LTRSATQAPA
760 770 780 790 800
AGVTVAAATT STMSTVTVTA PATAVTGSPV KKQRPLLPKE TVPAVQRVVW
810 820 830 840 850
NASSKFQTSS QKWHMQKIQR QQQQQQQQQQ SQQQSQQQQP QSSQGTRYQT
860 870 880 890 900
RQAVKAVQQK EVTQSPSTST ITLVTSTQPA ALVSSSGSAS TLASAINADL
910 920 930 940 950
PIATASADVA ADIAKYTSKM MDAIKGTMTE IYNDLSKNTT GSTIAEIRRL
960 970 980 990 1000
RIEIEKLQWL HQQELAEMKH NLELTMAEMR QSLEQERDRL IAEVKKQLEL
1010 1020 1030 1040 1050
EKQQAVDETK KKQWCANCKK EAIFYCCWNT SYCDYPCQQA HWPEHMKSCT
1060 1070 1080 1090 1100
QSATAPQQEA DAEASTETGN KSSQGNSSNT QSAPSEPASA PKEKEAPAEK
1110 1120 1130 1140 1150
SKDSSNSTLD LSGSRETPSS MLLGSNQSSV SKRCDKQPAY TPTTTDHQPH
1160 1170 1180 1190 1200
PNYPAQKYHS RSSKAGLWSS SEEKRASSRS EHSGGTSTKN LMPKESRESR

LDAFWD
Length:1,206
Mass (Da):133,560
Last modified:February 20, 2007 - v1
Checksum:i4B94150530360132
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL589902 Genomic DNA No translation available.
AL591712 Genomic DNA No translation available.
AL928840 Genomic DNA No translation available.
RefSeqiXP_006499471.1, XM_006499408.3
XP_011237815.1, XM_011239513.2
UniGeneiMm.227598

Genome annotation databases

EnsembliENSMUST00000099084; ENSMUSP00000096683; ENSMUSG00000039671
GeneIDi228880

Similar proteinsi

Entry informationi

Entry nameiA2A482_MOUSE
AccessioniPrimary (citable) accession number: A2A482
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: July 18, 2018
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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