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Protein
Submitted name:

Protocadherin-15

Gene

PCDH15

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Protocadherin-15Imported
Gene namesi
Name:PCDH15Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 10

Organism-specific databases

EuPathDBiHostDB:ENSG00000150275.17
HGNCiHGNC:14674 PCDH15

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000150275

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_500264261227 – 92Sequence analysisAdd BLAST66

Proteomic databases

PeptideAtlasiA2A3D9
PRIDEiA2A3D9

Expressioni

Gene expression databases

BgeeiENSG00000150275 Expressed in 67 organ(s), highest expression level in corpus callosum
ExpressionAtlasiA2A3D9 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliA2A3D9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3594 Eukaryota
ENOG410XQHI LUCA
GeneTreeiENSGT00920000148958
HOGENOMiHOG000230919

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 29 potential isoforms that are computationally mapped.Show allAlign All

A2A3D9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFRQFYLWTC LASGIILGSL FEICLGQYDD DCKLARGGPP ATIVAIDEES
60 70 80 90
RNGTILVDNM LIKGTAGGPD PTIELSLKDN VDYWVLMDPV KQ
Length:92
Mass (Da):10,139
Last modified:February 5, 2008 - v1
Checksum:iF54A75044517CDE3
GO

Computationally mapped potential isoform sequencesi

There are 29 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q96QU1PCD15_HUMAN
Protocadherin-15
PCDH15 USH1F
1,955Annotation score:
A2A3D8A2A3D8_HUMAN
Protocadherin-15
PCDH15
1,962Annotation score:
A0A087WTR6A0A087WTR6_HUMAN
Protocadherin-15
PCDH15
1,539Annotation score:
A0A087WZN9A0A087WZN9_HUMAN
Protocadherin-15
PCDH15
1,790Annotation score:
A2A3E3A2A3E3_HUMAN
Protocadherin-15
PCDH15
1,540Annotation score:
A0A087WZW3A0A087WZW3_HUMAN
Protocadherin-15
PCDH15
1,789Annotation score:
A2A3E7A2A3E7_HUMAN
Protocadherin-15
PCDH15
1,957Annotation score:
A2A3E8A2A3E8_HUMAN
Protocadherin-15
PCDH15
1,932Annotation score:
A2A3E6A2A3E6_HUMAN
Protocadherin-15
PCDH15
1,952Annotation score:
A9Z1W1A9Z1W1_HUMAN
Protocadherin-15
PCDH15
1,677Annotation score:
There are more potential isoformsShow all

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei92Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC013737 Genomic DNA No translation available.
AC016817 Genomic DNA No translation available.
AC024073 Genomic DNA No translation available.
AC027671 Genomic DNA No translation available.
AL353784 Genomic DNA No translation available.
AL360214 Genomic DNA No translation available.
AL365496 Genomic DNA No translation available.
AL391356 Genomic DNA No translation available.
KF455239 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000458638; ENSP00000394465; ENSG00000150275
UCSCiuc057tiw.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC013737 Genomic DNA No translation available.
AC016817 Genomic DNA No translation available.
AC024073 Genomic DNA No translation available.
AC027671 Genomic DNA No translation available.
AL353784 Genomic DNA No translation available.
AL360214 Genomic DNA No translation available.
AL365496 Genomic DNA No translation available.
AL391356 Genomic DNA No translation available.
KF455239 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliA2A3D9
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiA2A3D9
PRIDEiA2A3D9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000458638; ENSP00000394465; ENSG00000150275
UCSCiuc057tiw.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000150275.17
HGNCiHGNC:14674 PCDH15
OpenTargetsiENSG00000150275
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG3594 Eukaryota
ENOG410XQHI LUCA
GeneTreeiENSGT00920000148958
HOGENOMiHOG000230919

Miscellaneous databases

ChiTaRSiPCDH15 human

Gene expression databases

BgeeiENSG00000150275 Expressed in 67 organ(s), highest expression level in corpus callosum
ExpressionAtlasiA2A3D9 baseline and differential

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiA2A3D9_HUMAN
AccessioniPrimary (citable) accession number: A2A3D9
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: September 12, 2018
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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