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Protein

Protein FAM71E1

Gene

Fam71e1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM71E1
Gene namesi
Name:Fam71e1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:1922788 Fam71e1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003346981 – 212Protein FAM71E1Add BLAST212

Proteomic databases

PaxDbiA1L3C1
PRIDEiA1L3C1

PTM databases

PhosphoSitePlusiA1L3C1

Expressioni

Gene expression databases

BgeeiENSMUSG00000051113 Expressed in 72 organ(s), highest expression level in testis
ExpressionAtlasiA1L3C1 baseline and differential
GenevisibleiA1L3C1 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000103560

Family & Domainsi

Sequence similaritiesi

Belongs to the FAM71 family.Curated

Phylogenomic databases

eggNOGiENOG410J0B3 Eukaryota
ENOG411140M LUCA
GeneTreeiENSGT00530000063078
HOGENOMiHOG000112465
HOVERGENiHBG107890
InParanoidiA1L3C1
OMAiRCQLEVK
OrthoDBiEOG091G0EE4
TreeFamiTF336050

Family and domain databases

InterProiView protein in InterPro
IPR022168 DUF3699
PfamiView protein in Pfam
PF12480 DUF3699, 1 hit

Sequences (2+)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: A1L3C1-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MKGGRDLKAA RGGADRPLAP AYAPCRPGRL QRHLLSGEFD QLRDFPIFES
60 70 80 90 100
NFVQVTRFGE VANKVTMGVA ASSPALELPD LLLLAGPDKE NGHLQLLGLF
110 120 130 140 150
PLQFVQLFVH DESRQQLKVK FRTGRAFYLQ LRSPPETRDC EFGRWVRLLY
160 170 180 190 200
RLRFHSPTCA VPFTHEDTAP EEEEEEEEEE EEEEVKEGQL QPPEFQATEA
210
RLDPQVSELW GL
Length:212
Mass (Da):24,172
Last modified:October 3, 2012 - v2
Checksum:iF30567893EB433C5
GO
Isoform 2 (identifier: A1L3C1-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-66: Missing.

Show »
Length:146
Mass (Da):16,860
Checksum:iCA93C210A1774926
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0U1RNU0A0A0U1RNU0_MOUSE
Protein FAM71E1
Fam71e1
272Annotation score:
A0A0U1RNX3A0A0U1RNX3_MOUSE
Protein FAM71E1
Fam71e1
63Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti138R → L in AAI30018 (PubMed:15489334).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_0337611 – 66Missing in isoform 2. 1 PublicationAdd BLAST66

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC149607 Genomic DNA No translation available.
BC049752 mRNA Translation: AAH49752.1
BC130017 mRNA Translation: AAI30018.1
CCDSiCCDS52232.1 [A1L3C1-1]
RefSeqiNP_082445.1, NM_028169.1 [A1L3C1-1]
XP_006541312.1, XM_006541249.1
UniGeneiMm.258841

Genome annotation databases

EnsembliENSMUST00000107927; ENSMUSP00000103560; ENSMUSG00000051113 [A1L3C1-1]
GeneIDi75538
KEGGimmu:75538
UCSCiuc009gpr.2 mouse [A1L3C1-1]

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC149607 Genomic DNA No translation available.
BC049752 mRNA Translation: AAH49752.1
BC130017 mRNA Translation: AAI30018.1
CCDSiCCDS52232.1 [A1L3C1-1]
RefSeqiNP_082445.1, NM_028169.1 [A1L3C1-1]
XP_006541312.1, XM_006541249.1
UniGeneiMm.258841

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000103560

PTM databases

PhosphoSitePlusiA1L3C1

Proteomic databases

PaxDbiA1L3C1
PRIDEiA1L3C1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000107927; ENSMUSP00000103560; ENSMUSG00000051113 [A1L3C1-1]
GeneIDi75538
KEGGimmu:75538
UCSCiuc009gpr.2 mouse [A1L3C1-1]

Organism-specific databases

CTDi112703
MGIiMGI:1922788 Fam71e1

Phylogenomic databases

eggNOGiENOG410J0B3 Eukaryota
ENOG411140M LUCA
GeneTreeiENSGT00530000063078
HOGENOMiHOG000112465
HOVERGENiHBG107890
InParanoidiA1L3C1
OMAiRCQLEVK
OrthoDBiEOG091G0EE4
TreeFamiTF336050

Miscellaneous databases

PROiPR:A1L3C1
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000051113 Expressed in 72 organ(s), highest expression level in testis
ExpressionAtlasiA1L3C1 baseline and differential
GenevisibleiA1L3C1 MM

Family and domain databases

InterProiView protein in InterPro
IPR022168 DUF3699
PfamiView protein in Pfam
PF12480 DUF3699, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiF71E1_MOUSE
AccessioniPrimary (citable) accession number: A1L3C1
Secondary accession number(s): E9QKI6, Q0P5X9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: October 3, 2012
Last modified: November 7, 2018
This is version 63 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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