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Protein

Beta-1,4 N-acetylgalactosaminyltransferase

Gene

b4galnt1a

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferaseUniRule annotation, Transferase

Enzyme and pathway databases

ReactomeiR-DRE-1660662 Glycosphingolipid metabolism

Protein family/group databases

CAZyiGT12 Glycosyltransferase Family 12

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-1,4 N-acetylgalactosaminyltransferaseUniRule annotation
Gene namesi
Name:b4galnt1aImported
Synonyms:zgc:158609Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 23

Organism-specific databases

ZFINiZDB-GENE-070112-1462 b4galnt1a

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Golgi apparatusUniRule annotation, MembraneUniRule annotation

Expressioni

Gene expression databases

BgeeiENSDARG00000061520

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000082248

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini281 – 412Glyco_trans_2-likeInterPro annotationAdd BLAST132

Sequence similaritiesi

Belongs to the glycosyltransferase 2 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4111N56 LUCA
GeneTreeiENSGT00390000006679
HOGENOMiHOG000220853
HOVERGENiHBG004812
TreeFamiTF332297

Family and domain databases

Gene3Di3.90.550.10, 1 hit
InterProiView protein in InterPro
IPR001173 Glyco_trans_2-like
IPR011143 GM2_synthase
IPR029044 Nucleotide-diphossugar_trans
PfamiView protein in Pfam
PF00535 Glycos_transf_2, 1 hit
PIRSFiPIRSF000474 GM2_GD2_synthase, 1 hit
SUPFAMiSSF53448 SSF53448, 1 hit

Sequencei

Sequence statusi: Complete.

A1L229-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVVNRKAVV VLLVLLPLTA MYFYYWNLNS ITTINVLQGP DSLKMILEKR
60 70 80 90 100
SQSLQHTNDH IPYQIKDDVF NRSLALNGCV CEGNKPGITF PFSKLLFPEI
110 120 130 140 150
SATRLEAMFD DSDLQKAKQY RSKEYQRYRK RAYTAADSLI LSEANSPLQY
160 170 180 190 200
PTQGVEVRPT RSILIPGLSL NQKSEKGPYL VDLIATMGIF STAAVVDGVQ
210 220 230 240 250
VEGEGEMQIH FMSRSLASLN RQLEFVTYTN TRFHPNTADV VQFKSGAFQA
260 270 280 290 300
SFTVKIRHPP MPKFYNPAPT QEYNVNTLVT IATKTFLRYD KLQDLINSIR
310 320 330 340 350
QFYPTTTIVI ADDTKEPKPV TGPHIEHYIM PFGKGWFAGR NLAISQVTTK
360 370 380 390 400
YVLWVDDDFI FTSNTKLEKM VDLLEKTTLD LVGGAVREVT GYTATYRHML
410 420 430 440 450
STDAGDEEGD CLHIRTGFHH VIEGFPNCVV TDAVINFFMA RTEKIQQVGF
460 470 480 490 500
DPRLARVGHL GFFIDGLGSL HVGSCNDVII NHASKIKAML PWGQSDIDKA
510 520 530
YSKFRYHSTK ETSMNEYDLY YLKNHFQCVT SD
Length:532
Mass (Da):60,309
Last modified:February 6, 2007 - v1
Checksum:iAFFEBEAB8696FDAB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX663515 Genomic DNA No translation available.
BC129323 mRNA Translation: AAI29324.1
RefSeqiNP_001074039.1, NM_001080570.1
XP_005162313.1, XM_005162256.3
UniGeneiDr.42820

Genome annotation databases

EnsembliENSDART00000087815; ENSDARP00000082248; ENSDARG00000061520
ENSDART00000164573; ENSDARP00000141480; ENSDARG00000117038
GeneIDi558684
KEGGidre:558684

Similar proteinsi

Entry informationi

Entry nameiA1L229_DANRE
AccessioniPrimary (citable) accession number: A1L229
Entry historyiIntegrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: July 18, 2018
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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