UniProtKB - A1D510 (A1D510_NEOFI)
Protein
DNA-directed RNA polymerase subunit beta
Gene
NFIA_022140
Organism
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) (Aspergillus fischerianus)
Status
Functioni
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.UniRule annotation
Catalytic activityi
- EC:2.7.7.6UniRule annotation
GO - Molecular functioni
- DNA binding Source: InterPro
- DNA-directed 5'-3' RNA polymerase activity Source: UniProtKB-KW
- ribonucleoside binding Source: InterPro
GO - Biological processi
- transcription, DNA-templated Source: InterPro
Keywordsi
Molecular function | NucleotidyltransferaseUniRule annotation, Transferase |
Biological process | Transcription |
Names & Taxonomyi
Protein namesi | Recommended name: DNA-directed RNA polymerase subunit betaUniRule annotation (EC:2.7.7.6UniRule annotation) |
Gene namesi | ORF Names:NFIA_022140Imported |
Organismi | Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) (Aspergillus fischerianus)Imported |
Taxonomic identifieri | 331117 [NCBI] |
Taxonomic lineagei | Eukaryota › Fungi › Dikarya › Ascomycota › Pezizomycotina › Eurotiomycetes › Eurotiomycetidae › Eurotiales › Aspergillaceae › Aspergillus › |
Proteomesi |
|
Organism-specific databases
EuPathDBi | FungiDB:NFIA_022140 |
Subcellular locationi
Keywords - Cellular componenti
DNA-directed RNA polymeraseUniRule annotationImportedFamily & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 91 – 476 | RNA_pol_Rpb2_1InterPro annotationAdd BLAST | 386 | |
Domaini | 245 – 424 | RNA_pol_Rpb2_2InterPro annotationAdd BLAST | 180 | |
Domaini | 503 – 566 | RNA_pol_Rpb2_3InterPro annotationAdd BLAST | 64 | |
Domaini | 605 – 664 | RNA_pol_Rpb2_4InterPro annotationAdd BLAST | 60 | |
Domaini | 685 – 725 | RNA_pol_Rpb2_5InterPro annotationAdd BLAST | 41 | |
Domaini | 732 – 1103 | RNA_pol_Rpb2_6InterPro annotationAdd BLAST | 372 | |
Domaini | 1105 – 1189 | RNA_pol_Rpb2_7InterPro annotationAdd BLAST | 85 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 53 | DisorderedSequence analysisAdd BLAST | 53 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 12 – 28 | PolarSequence analysisAdd BLAST | 17 | |
Compositional biasi | 34 – 50 | PolyampholyteSequence analysisAdd BLAST | 17 |
Sequence similaritiesi
Belongs to the RNA polymerase beta chain family.UniRule annotation
Phylogenomic databases
HOGENOMi | HOG000222962 |
KOi | K03021 |
OMAi | RFNWELK |
OrthoDBi | 42570at2759 |
Family and domain databases
CDDi | cd00653 RNA_pol_B_RPB2, 1 hit |
Gene3Di | 2.40.270.10, 1 hit 2.40.50.150, 1 hit 3.90.1110.10, 1 hit |
InterProi | View protein in InterPro IPR015712 DNA-dir_RNA_pol_su2 IPR007120 DNA-dir_RNAP_su2_dom IPR037033 DNA-dir_RNAP_su2_hyb_sf IPR007121 RNA_pol_bsu_CS IPR007644 RNA_pol_bsu_protrusion IPR007642 RNA_pol_Rpb2_2 IPR037034 RNA_pol_Rpb2_2_sf IPR007645 RNA_pol_Rpb2_3 IPR007646 RNA_pol_Rpb2_4 IPR007647 RNA_pol_Rpb2_5 IPR007641 RNA_pol_Rpb2_7 IPR014724 RNA_pol_RPB2_OB-fold |
PANTHERi | PTHR20856 PTHR20856, 1 hit |
Pfami | View protein in Pfam PF04563 RNA_pol_Rpb2_1, 1 hit PF04561 RNA_pol_Rpb2_2, 1 hit PF04565 RNA_pol_Rpb2_3, 1 hit PF04566 RNA_pol_Rpb2_4, 1 hit PF04567 RNA_pol_Rpb2_5, 1 hit PF00562 RNA_pol_Rpb2_6, 1 hit PF04560 RNA_pol_Rpb2_7, 1 hit |
PROSITEi | View protein in PROSITE PS01166 RNA_POL_BETA, 1 hit |
i Sequence
Sequence statusi: Complete.
A1D510-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MPPRRRPQPA AASQARSAQP SESKLPTNPA PAAENVEKDD RADEPSGPTY
60 70 80 90 100
RYRDPFDALL EPFYYNKSLT DPINTAKDKW NLLPAFLKVK GLVKQHIDSY
110 120 130 140 150
NYFIEVQLKK IVESSSTIRS DIDHTFYIKF TDIYVGSPCR ADEPQDVTPD
160 170 180 190 200
ATPSDVSPHE CRLRDTTYAA PILVNFEYIR GRQRVTRKGV SIGRMPIMLR
210 220 230 240 250
SSKCVLANKT PSEMTVLNEC PLDPGGYFIV NGTEKVILVQ EQLSKNRIIV
260 270 280 290 300
ETDPKKEIVQ ASVTSSSNER KSKSYIILKK DKLYVKHNVL SEDIPIVILL
310 320 330 340 350
RAMGIHTEQE MLLLVAGVDS LYQDDFAINF EESIKLGIYT QQQALDWIGA
360 370 380 390 400
RIKINRKQSS YRRTHIQEAV EAIASVIISH IEVKNMNFRP KAVYVAHMAR
410 420 430 440 450
RVLMAKNDPS LVDDRDYLGN KRLELAGQLL ALLFEDLFKK FCFDIKMNID
460 470 480 490 500
KVLNKRNRAE QFDAWTVMSM HSNHITQGMN RAISTGNWSL KRFRMERAGV
510 520 530 540 550
THVLSRLSYI AALGMMTRIS SQFEKTRKVS GPRALQPSQF GMLCPADTPE
560 570 580 590 600
GEACGLVKNL ALMTHITTND EEGPIKNLVF MLGAEDIMAL GGKQLYTPGS
610 620 630 640 650
YTISINGTPI ALTRRPKYFL NAFRRLRRMG RISEFVSIYI NHHQCAVHIA
660 670 680 690 700
TDDGRICRPL IVVENGRSLV TARHLDKLRD GTMQFDDFLA QGLVEYLDVN
710 720 730 740 750
EENDSLIALY EKDITDTTTH LEIEPFTVLG AVAGLIPYPH HNQSPRNTYQ
760 770 780 790 800
CAMGKQAIGA IASNQFLRID SILYLMVYPQ KPMVKSRTIE LVKYDQLPAG
810 820 830 840 850
QNAMVAVMSY SGYDIEDALV LNKGSVDRGF GRCQVFRKYV TNLKSYSNGT
860 870 880 890 900
KDRLNPPTYE NGAPIRKHAL LEADGLAAVG EQVNAGEVYI NKSTPEQSNL
910 920 930 940 950
SGIGSDAGRP VQYTPTPMTY KLHDPAYIDK VMYSVQENEN QLVKVLVRQT
960 970 980 990 1000
RRPEVGDKFS SRHGQKGVVG IIADQADMPF TDAGINPDII MNPHGFPSRM
1010 1020 1030 1040 1050
TVGKMLELVA GKAGVLAGHH GYGTCFGGTP VEEASRILID HGFSYGGKDY
1060 1070 1080 1090 1100
LTSGITGEAL PFYVFTGPIY YQKLKHMVQD KMHSRARGPR AILTRQPTEG
1110 1120 1130 1140 1150
RSRDGGLRLG EMERDCLIAY GTSQLLLERL MISSDRHEID VCEQCGFMGY
1160 1170 1180 1190 1200
LNWCQRCKSS RSVVKMTIPY AAKLLIQELM SMNVTARLKL DDEFPEWKGT
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | DS027688 Genomic DNA Translation: EAW23503.1 |
RefSeqi | XP_001265400.1, XM_001265399.1 |
Genome annotation databases
EnsemblFungii | EAW23503; EAW23503; NFIA_022140 |
GeneIDi | 4590753 |
KEGGi | nfi:NFIA_022140 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | DS027688 Genomic DNA Translation: EAW23503.1 |
RefSeqi | XP_001265400.1, XM_001265399.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 36630.CADNFIAP00000595 |
Genome annotation databases
EnsemblFungii | EAW23503; EAW23503; NFIA_022140 |
GeneIDi | 4590753 |
KEGGi | nfi:NFIA_022140 |
Organism-specific databases
EuPathDBi | FungiDB:NFIA_022140 |
Phylogenomic databases
HOGENOMi | HOG000222962 |
KOi | K03021 |
OMAi | RFNWELK |
OrthoDBi | 42570at2759 |
Family and domain databases
CDDi | cd00653 RNA_pol_B_RPB2, 1 hit |
Gene3Di | 2.40.270.10, 1 hit 2.40.50.150, 1 hit 3.90.1110.10, 1 hit |
InterProi | View protein in InterPro IPR015712 DNA-dir_RNA_pol_su2 IPR007120 DNA-dir_RNAP_su2_dom IPR037033 DNA-dir_RNAP_su2_hyb_sf IPR007121 RNA_pol_bsu_CS IPR007644 RNA_pol_bsu_protrusion IPR007642 RNA_pol_Rpb2_2 IPR037034 RNA_pol_Rpb2_2_sf IPR007645 RNA_pol_Rpb2_3 IPR007646 RNA_pol_Rpb2_4 IPR007647 RNA_pol_Rpb2_5 IPR007641 RNA_pol_Rpb2_7 IPR014724 RNA_pol_RPB2_OB-fold |
PANTHERi | PTHR20856 PTHR20856, 1 hit |
Pfami | View protein in Pfam PF04563 RNA_pol_Rpb2_1, 1 hit PF04561 RNA_pol_Rpb2_2, 1 hit PF04565 RNA_pol_Rpb2_3, 1 hit PF04566 RNA_pol_Rpb2_4, 1 hit PF04567 RNA_pol_Rpb2_5, 1 hit PF00562 RNA_pol_Rpb2_6, 1 hit PF04560 RNA_pol_Rpb2_7, 1 hit |
PROSITEi | View protein in PROSITE PS01166 RNA_POL_BETA, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A1D510_NEOFI | |
Accessioni | A1D510Primary (citable) accession number: A1D510 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | January 23, 2007 |
Last sequence update: | January 23, 2007 | |
Last modified: | October 16, 2019 | |
This is version 81 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |