Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Family with sequence similarity 134, member A

Gene

retreg2

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Family with sequence similarity 134, member AImported
Submitted name:
Reticulophagy regulator family member 2Imported
Gene namesi
Name:retreg2Imported
Synonyms:fam134aImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 1

Organism-specific databases

ZFINiZDB-GENE-061215-128 retreg2

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei85 – 102HelicalSequence analysisAdd BLAST18
Transmembranei189 – 208HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSDARG00000063270 Expressed in 17 organ(s), highest expression level in mature ovarian follicle

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000086709

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IE8D Eukaryota
ENOG4111EY9 LUCA
GeneTreeiENSGT00530000063240
HOGENOMiHOG000116418
HOVERGENiHBG093247
OrthoDBiEOG091G08S3
TreeFamiTF329111

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A1A604-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASRRASVSS CSAGLEAWFP APGGAEEEPE LRRLRERLRG CLSQCEPAVV
60 70 80 90 100
LLQRLLVWER PLHSIIAALA LNTLFWLLSS TSLRPLFLLS VFLIGLTLLE
110 120 130 140 150
RWKDKLPQIT AWRPEASVIE REALSDQLRL LSVEELSHHL AESYLTFSLY
160 170 180 190 200
IQEMLQYKRQ NHGKFCIMMC SGCFTMAVVG HYIPGVMITY IILLSVLLWP
210 220 230 240 250
LVVYHELIQK MYTRLEPILM KLDYSMKGDT QRRKYDKRKM KKEQEDGDEP
260 270 280 290 300
RAETESESEE ELSCFAPTVD VKTTALAMAI TDSELSDEEA SILESGGFSV
310 320 330 340 350
SRATTPQLTD LSEDLDQQSV HSEPEEAFTR DLAEFPSVDE LPSIEPGLFH
360 370 380 390 400
FPLGVLGSDP TGASGSGEEA LSPASLLIQH LASPLHFVNT HFNGHGQAAA
410 420 430 440 450
GTVPHQSIVG TQRESVSRPA RSLEALSEEI VSTAISTVVQ NTLSALLRST
460 470 480 490 500
EASEGSSMDS FLPSETPPCP MESPIESPSQ ENEEEASTEE QPDVTLVPQE
510 520 530 540
EEDFELLDQS ELEQMDEGEG LGLDVGGAST DTPPSSQQHA ERQDS
Length:545
Mass (Da):60,247
Last modified:January 23, 2007 - v1
Checksum:i71D5D90C4D1F4FC4
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F1RBE5F1RBE5_DANRE
Reticulophagy regulator family memb...
retreg2 fam134a
270Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX004814 Genomic DNA No translation available.
BC128884 mRNA Translation: AAI28885.1
RefSeqiNP_001073483.1, NM_001080014.1
UniGeneiDr.85874

Genome annotation databases

EnsembliENSDART00000092277; ENSDARP00000086709; ENSDARG00000063270
GeneIDi564232
KEGGidre:564232

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX004814 Genomic DNA No translation available.
BC128884 mRNA Translation: AAI28885.1
RefSeqiNP_001073483.1, NM_001080014.1
UniGeneiDr.85874

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000086709

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000092277; ENSDARP00000086709; ENSDARG00000063270
GeneIDi564232
KEGGidre:564232

Organism-specific databases

CTDi79137
ZFINiZDB-GENE-061215-128 retreg2

Phylogenomic databases

eggNOGiENOG410IE8D Eukaryota
ENOG4111EY9 LUCA
GeneTreeiENSGT00530000063240
HOGENOMiHOG000116418
HOVERGENiHBG093247
OrthoDBiEOG091G08S3
TreeFamiTF329111

Gene expression databases

BgeeiENSDARG00000063270 Expressed in 17 organ(s), highest expression level in mature ovarian follicle

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiA1A604_DANRE
AccessioniPrimary (citable) accession number: A1A604
Entry historyiIntegrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: September 12, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again