UniProtKB - A0QW21 (A0QW21_MYCS2)
Protein
Submitted name:
Ribonuclease D
Gene
MSMEG_2778
Organism
Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis)
Status
Functioni
GO - Molecular functioni
- 3'-5' exonuclease activity Source: InterPro
- nucleic acid binding Source: InterPro
- nucleotide binding Source: InterPro
Enzyme and pathway databases
BioCyci | MSME246196:G1H7P-2776-MONOMER |
Names & Taxonomyi
Protein namesi | Submitted name: Ribonuclease DImported |
Gene namesi | Ordered Locus Names:MSMEG_2778Imported |
Organismi | Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis)Imported |
Taxonomic identifieri | 246196 [NCBI] |
Taxonomic lineagei | Bacteria › Actinobacteria › Corynebacteriales › Mycobacteriaceae › Mycolicibacterium › |
Proteomesi |
|
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 237 – 317 | HRDCInterPro annotationAdd BLAST | 81 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 23 | DisorderedSequence analysisAdd BLAST | 23 | |
Regioni | 310 – 336 | DisorderedSequence analysisAdd BLAST | 27 |
Phylogenomic databases
eggNOGi | COG0349, Bacteria |
OMAi | IDPIACP |
OrthoDBi | 1462689at2 |
Family and domain databases
Gene3Di | 3.30.420.10, 1 hit |
InterProi | View protein in InterPro IPR002562, 3'-5'_exonuclease_dom IPR041605, Exo_C IPR010997, HRDC-like_sf IPR002121, HRDC_dom IPR012337, RNaseH-like_sf IPR036397, RNaseH_sf |
Pfami | View protein in Pfam PF01612, DNA_pol_A_exo1, 1 hit PF18305, DNA_pol_A_exoN, 1 hit PF00570, HRDC, 1 hit |
SMARTi | View protein in SMART SM00474, 35EXOc, 1 hit SM00341, HRDC, 1 hit |
SUPFAMi | SSF47819, SSF47819, 1 hit SSF53098, SSF53098, 1 hit |
PROSITEi | View protein in PROSITE PS50967, HRDC, 1 hit |
i Sequence
Sequence statusi: Complete.
A0QW21-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MTQGDTEPAD VEEAEATPLL TPAEGVPELC VSADEIAGAA RQLAGGSGPF
60 70 80 90 100
AIDAERASGF RYSNRAYLVQ IRRAGAGTAL IDPVNHGGSP IDTLEPVAQT
110 120 130 140 150
LADDEWVLHA ADQDLPCLAE IGLRPGKLYD TELAGRLAGF ERVNLAAMVQ
160 170 180 190 200
RLLGLQLMKG HGAADWSKRP LPDEWLNYAA LDVEVLLELR HAIAAVLEEQ
210 220 230 240 250
GKTEWAAQEF EHLRTYVAQP TRRDRWRRTS GIHKVRNPRA LAAVRELWTT
260 270 280 290 300
RDNIARSRDI APGRILPDAA IINAATVDPK TTAELTALPV FGGAKQRRSA
310 320 330 340 350
QVWLDALNRA RQNPDPPSAS EASNGPPPAA RWARRKPEAA ARLEAARAGL
360 370 380 390 400
AELSERVSVP AENLITPEVV RRLCWDWQPV ADVASTVEEF LVDNQVRPWQ
410
RELTVPVLTV ALAEN
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CP000480 Genomic DNA Translation: ABK70095.1 |
RefSeqi | WP_011728577.1, NZ_SIJM01000032.1 YP_887109.1, NC_008596.1 |
Genome annotation databases
EnsemblBacteriai | ABK70095; ABK70095; MSMEG_2778 AFP39177; AFP39177; MSMEI_2709 |
KEGGi | msm:MSMEG_2778 |
PATRICi | fig|246196.19.peg.2746 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CP000480 Genomic DNA Translation: ABK70095.1 |
RefSeqi | WP_011728577.1, NZ_SIJM01000032.1 YP_887109.1, NC_008596.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 246196.MSMEI_2709 |
Genome annotation databases
EnsemblBacteriai | ABK70095; ABK70095; MSMEG_2778 AFP39177; AFP39177; MSMEI_2709 |
KEGGi | msm:MSMEG_2778 |
PATRICi | fig|246196.19.peg.2746 |
Phylogenomic databases
eggNOGi | COG0349, Bacteria |
OMAi | IDPIACP |
OrthoDBi | 1462689at2 |
Enzyme and pathway databases
BioCyci | MSME246196:G1H7P-2776-MONOMER |
Family and domain databases
Gene3Di | 3.30.420.10, 1 hit |
InterProi | View protein in InterPro IPR002562, 3'-5'_exonuclease_dom IPR041605, Exo_C IPR010997, HRDC-like_sf IPR002121, HRDC_dom IPR012337, RNaseH-like_sf IPR036397, RNaseH_sf |
Pfami | View protein in Pfam PF01612, DNA_pol_A_exo1, 1 hit PF18305, DNA_pol_A_exoN, 1 hit PF00570, HRDC, 1 hit |
SMARTi | View protein in SMART SM00474, 35EXOc, 1 hit SM00341, HRDC, 1 hit |
SUPFAMi | SSF47819, SSF47819, 1 hit SSF53098, SSF53098, 1 hit |
PROSITEi | View protein in PROSITE PS50967, HRDC, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0QW21_MYCS2 | |
Accessioni | A0QW21Primary (citable) accession number: A0QW21 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | January 9, 2007 |
Last sequence update: | January 9, 2007 | |
Last modified: | February 10, 2021 | |
This is version 102 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |