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Protein

30S ribosomal protein S8

Gene

rpsH

Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S8UniRule annotation
Gene namesi
Name:rpsHUniRule annotation
Ordered Locus Names:MSMEG_1469, MSMEI_1433
OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Taxonomic identifieri246196 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycolicibacterium
Proteomesi
  • UP000006158 Componenti: Chromosome
  • UP000000757 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00003057502 – 13230S ribosomal protein S8Add BLAST131

Proteomic databases

PRIDEiA0QSG3

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.UniRule annotation

Protein-protein interaction databases

STRINGi246196.MSMEG_1469

Structurei

Secondary structure

1132
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliA0QSG3
SMRiA0QSG3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS8 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UJY Bacteria
COG0096 LUCA
HOGENOMiHOG000204095
KOiK02994
OMAiFDQGYIL
OrthoDBiPOG091H027A

Family and domain databases

HAMAPiMF_01302_B Ribosomal_S8_B, 1 hit
InterProiView protein in InterPro
IPR000630 Ribosomal_S8
IPR035987 Ribosomal_S8_sf
PANTHERiPTHR11758 PTHR11758, 1 hit
PfamiView protein in Pfam
PF00410 Ribosomal_S8, 1 hit
SUPFAMiSSF56047 SSF56047, 1 hit
PROSITEiView protein in PROSITE
PS00053 RIBOSOMAL_S8, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A0QSG3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTMTDPIADF LTRLRNANSA YHDEVTLPHS KLKANIAEIL KREGYISDYR
60 70 80 90 100
TEDARVGKSL VVQLKYGPSR ERSIAGLRRV SKPGLRVYAK STNLPRVLGG
110 120 130
LGVAIISTSS GLLTDRQAAR QGVGGEVLAY VW
Length:132
Mass (Da):14,471
Last modified:January 9, 2007 - v1
Checksum:i465820E7F60B0E8D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA Translation: ABK75423.1
CP001663 Genomic DNA Translation: AFP37906.1
RefSeqiWP_003892856.1, NZ_CP009494.1
YP_885851.1, NC_008596.1

Genome annotation databases

EnsemblBacteriaiABK75423; ABK75423; MSMEG_1469
AFP37906; AFP37906; MSMEI_1433
GeneIDi4536927
KEGGimsb:LJ00_07340
msg:MSMEI_1433
msm:MSMEG_1469
PATRICifig|246196.19.peg.1454

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA Translation: ABK75423.1
CP001663 Genomic DNA Translation: AFP37906.1
RefSeqiWP_003892856.1, NZ_CP009494.1
YP_885851.1, NC_008596.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5O5Jelectron microscopy3.45H1-132[»]
5O61electron microscopy3.31BH1-132[»]
5XYUelectron microscopy3.45H1-132[»]
ProteinModelPortaliA0QSG3
SMRiA0QSG3
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246196.MSMEG_1469

Proteomic databases

PRIDEiA0QSG3

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK75423; ABK75423; MSMEG_1469
AFP37906; AFP37906; MSMEI_1433
GeneIDi4536927
KEGGimsb:LJ00_07340
msg:MSMEI_1433
msm:MSMEG_1469
PATRICifig|246196.19.peg.1454

Phylogenomic databases

eggNOGiENOG4108UJY Bacteria
COG0096 LUCA
HOGENOMiHOG000204095
KOiK02994
OMAiFDQGYIL
OrthoDBiPOG091H027A

Family and domain databases

HAMAPiMF_01302_B Ribosomal_S8_B, 1 hit
InterProiView protein in InterPro
IPR000630 Ribosomal_S8
IPR035987 Ribosomal_S8_sf
PANTHERiPTHR11758 PTHR11758, 1 hit
PfamiView protein in Pfam
PF00410 Ribosomal_S8, 1 hit
SUPFAMiSSF56047 SSF56047, 1 hit
PROSITEiView protein in PROSITE
PS00053 RIBOSOMAL_S8, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRS8_MYCS2
AccessioniPrimary (citable) accession number: A0QSG3
Secondary accession number(s): I7G432
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 2, 2007
Last sequence update: January 9, 2007
Last modified: June 20, 2018
This is version 73 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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