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Protein

50S ribosomal protein L23

Gene

rplW

Organism
Mycobacterium avium (strain 104)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L23UniRule annotation
Gene namesi
Name:rplWUniRule annotation
Ordered Locus Names:MAV_4469
OrganismiMycobacterium avium (strain 104)
Taxonomic identifieri243243 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
Proteomesi
  • UP000001574 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000681101 – 10050S ribosomal protein L23Add BLAST100

Proteomic databases

PRIDEiA0QL16

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliA0QL16
SMRiA0QL16
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL23 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000231366
KOiK02892
OMAiTMNPPRR

Family and domain databases

Gene3Di3.30.70.330, 1 hit
HAMAPiMF_01369_B Ribosomal_L23_B, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR012678 Ribosomal_L23/L15e_core_dom_sf
IPR001014 Ribosomal_L23/L25_CS
IPR013025 Ribosomal_L25/23
PfamiView protein in Pfam
PF00276 Ribosomal_L23, 1 hit
SUPFAMiSSF54189 SSF54189, 1 hit
PROSITEiView protein in PROSITE
PS00050 RIBOSOMAL_L23, 1 hit

Sequencei

Sequence statusi: Complete.

A0QL16-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATVTDPRDI ILAPVISEKS YSLLDDNVYT FVVHPDSNKT QIKIAIEKIF
60 70 80 90 100
SVKVASVNTA NRQGKRKRTR TGFGKRKSTK RAIVTLAPGS KPIDLFGAPA
Length:100
Mass (Da):10,957
Last modified:January 9, 2007 - v1
Checksum:i9EC03EE821B682EC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000479 Genomic DNA Translation: ABK64442.1
RefSeqiWP_003873516.1, NC_008595.1

Genome annotation databases

EnsemblBacteriaiABK64442; ABK64442; MAV_4469
GeneIDi2719552
KEGGimav:MAV_4469

Similar proteinsi

Entry informationi

Entry nameiRL23_MYCA1
AccessioniPrimary (citable) accession number: A0QL16
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: January 9, 2007
Last modified: May 23, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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