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Entry version 59 (02 Jun 2021)
Sequence version 1 (09 Jan 2007)
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Protein
Submitted name:

Uncharacterized protein

Gene

pdpC

Organism
Francisella tularensis subsp. novicida (strain U112)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

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BioCyci
FTUL401614:G1G75-1364-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:pdpCImported
Ordered Locus Names:FTN_1319Imported
ORF Names:AW25_685Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiFrancisella tularensis subsp. novicida (strain U112)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri401614 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesFrancisellaceaeFrancisella
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000762 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome
  • UP000031872 Componenti: Chromosome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1147 – 1167Sequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

Identification of Orthologs from Complete Genome Data

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OMAi
DYLAYMR

Database of Orthologous Groups

More...
OrthoDBi
6610at2

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0Q7I0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNDKYELNIY FEKIELPKTA DFNMISKHDI KELRVDANLK KKIHLLQFDE
60 70 80 90 100
DYLAYMRSLR AIHPSKIAMQ KIKSIRNKED SFIIAIFSLD KIIHKTKFIS
110 120 130 140 150
FGHKTVIFDF KKLWGLVDFV IVHTSNKTWV NHKLTSFMPS ITYCNQNIIH
160 170 180 190 200
LAYHSDFLYI YHTPEFMDDI NVDRENRREL VAKIPDPYWV RADTKENKIN
210 220 230 240 250
INSEEENIEK DLKKITKLKN FEISANDIFF SKAIKAAPRL QHKNKSKLFN
260 270 280 290 300
SLAIENNEKI KRDIIDYAIS NAWYKNEGLL ENLMTFLDAL VVRHLYLIAV
310 320 330 340 350
YSVYEIEIGI KSVKPEYSKL LKAGLLNKDI QNQLIYDQKK ISNIIWLGET
360 370 380 390 400
FHGLDIEEAE DLCELIDQGD INPKINPINP EKLYRAYKEN YGNEALSFRE
410 420 430 440 450
YKEKYNFLDN DKLREEHANK LSSILEDPKF RVLSYINAFL CSTKNYLVPY
460 470 480 490 500
GYLGSNPLTY YNCMLETGKR RTSKEAYFAD IRNKLFMVCY LPGFLSSVIA
510 520 530 540 550
DDDFIDWYSN KKENQELLKN SYLNNLYKSK QKYIKDFIDL DIIKLLKQTS
560 570 580 590 600
SQIKPSYIPV AFRYGAFAST TALIRSNANV SNRMEFELYD SPERLHNQYS
610 620 630 640 650
EKEEMIMPKS VNNPKDHSID NGISLFSLNL TNEKEDGLRK VMLKVAQLYN
660 670 680 690 700
LDFKVGISGN LDQAMTQALI LGMATTKKNG DILLDEDQML YMTYLYCIFM
710 720 730 740 750
AHSVDHTVDE ILMSANTYLL NSEEVKYPIF NIADFFARPV FGLSKDKEFK
760 770 780 790 800
SLVEKYENSL KPNSKILKEN YISRVVTLSE VYEDIYNLNC LYSSLSEGSL
810 820 830 840 850
YNLLSTHSER HCTLLEQYSR KKKAEIGLVQ DGEKIKVVNN YSGYAAINQY
860 870 880 890 900
QRFVSLGRMY DSGAKYSSSH KKQIEKDFNL YLPDKEQINY LKYNFKDNKF
910 920 930 940 950
DAVYKNKKSK EKNQSHIVYA KKQNTRYCYG YFNDFFVKNR ITTFYKIKDK
960 970 980 990 1000
SGNYLVNLHN EKYSFATPNS DSKIYRVSPE LLNNRDDFKR VSKDIIKSYK
1010 1020 1030 1040 1050
YISFDKQKED IVKNFGKNLY HTNYEIWVGL SHQAISCFSV LDNIDTQEAA
1060 1070 1080 1090 1100
NTFIDALYYV RLMQLYYGKT IPFLWISSEI VRYSSSETHY YIPTEENFEN
1110 1120 1130 1140 1150
ILKIALNNAS KPVIERFLII LNIYNSTIDN NALILIRCRL PIILFEYEEQ
1160 1170 1180 1190 1200
KLKLKALQKC ADSYKKNNYK NEINFSAWFE SIFHVQNLSL SPNYIGNNIL
1210 1220 1230 1240 1250
ILSLVEELKP KCSEYKKNMI NQQITAKANE LNFYQLLIRL IEISTYHRIL
1260 1270 1280 1290 1300
TKSIITNTTS LLYDILNKPE FQTINKLINK LFIYKNKDLN TDKYKAFHTK
1310 1320
LITIESTYKK INSLYKSDFF KKISS
Length:1,325
Mass (Da):155,601
Last modified:January 9, 2007 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i1015CA2D11B20D02
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
CP000439 Genomic DNA Translation: ABK90195.1
CP009633 Genomic DNA Translation: AJI61927.1

NCBI Reference Sequences

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RefSeqi
WP_003040134.1, NZ_CP009633.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ABK90195; ABK90195; FTN_1319

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ftn:FTN_1319
ftx:AW25_685

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000439 Genomic DNA Translation: ABK90195.1
CP009633 Genomic DNA Translation: AJI61927.1
RefSeqiWP_003040134.1, NZ_CP009633.1

3D structure databases

Database of comparative protein structure models

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ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiABK90195; ABK90195; FTN_1319
KEGGiftn:FTN_1319
ftx:AW25_685

Phylogenomic databases

OMAiDYLAYMR
OrthoDBi6610at2

Enzyme and pathway databases

BioCyciFTUL401614:G1G75-1364-MONOMER

Family and domain databases

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0Q7I0_FRATN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0Q7I0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: June 2, 2021
This is version 59 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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