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Protein
Submitted name:

Membrane associated methyl-accepting chemotaxis protein with HAMP domain

Gene

NT01CX_1196

Organism
Clostridium novyi (strain NT)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Enzyme and pathway databases

BioCyciCNOV386415:G1G6M-326-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Membrane associated methyl-accepting chemotaxis protein with HAMP domainImported
Gene namesi
Ordered Locus Names:NT01CX_1196Imported
OrganismiClostridium novyi (strain NT)Imported
Taxonomic identifieri386415 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
Proteomesi
  • UP000008220 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei192 – 215HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 35Sequence analysisAdd BLAST35
ChainiPRO_500262943736 – 574Sequence analysisAdd BLAST539

Interactioni

Protein-protein interaction databases

STRINGi386415.NT01CX_1196

Structurei

3D structure databases

ProteinModelPortaliA0PY27
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini216 – 268HAMPInterPro annotationAdd BLAST53
Domaini287 – 524Methyl-accepting transducerInterPro annotationAdd BLAST238

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili112 – 132Sequence analysisAdd BLAST21
Coiled coili166 – 186Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q Bacteria
COG0840 LUCA
HOGENOMiHOG000055361
OMAiEIRIMAE
OrthoDBiPOG091H0QRR

Family and domain databases

CDDicd06225 HAMP, 1 hit
InterProiView protein in InterPro
IPR004090 Chemotax_Me-accpt_rcpt
IPR003660 HAMP_dom
IPR024478 HlyB_4HB_MCP
IPR004089 MCPsignal_dom
PfamiView protein in Pfam
PF12729 4HB_MCP_1, 1 hit
PF00015 MCPsignal, 1 hit
PRINTSiPR00260 CHEMTRNSDUCR
SMARTiView protein in SMART
SM00304 HAMP, 1 hit
SM00283 MA, 1 hit
PROSITEiView protein in PROSITE
PS50111 CHEMOTAXIS_TRANSDUC_2, 1 hit
PS50885 HAMP, 1 hit

Sequencei

Sequence statusi: Complete.

A0PY27-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDFLKKISVK KKMIFSYSAL LMLMIISGVI GVVSAKKLND NSKQMYFKSL
60 70 80 90 100
QSIEYIQEIK NNIDEEATCI LNIIYNEDLN QNDRNNIYKH ITVDLKNKNQ
110 120 130 140 150
ELFEKYEKIP FTEEEKRDYN EFKHELENYR NVRGDILTLV NNGNINGAKQ
160 170 180 190 200
IFASKIKPIR EKTESKLNAI NDMNETQAKI SDEENRKVFQ NIIFISSAVT
210 220 230 240 250
IVGIILALVL AIIMIRDIIS SLNRIRAYAR RLSEYDFSTP IVVRGTDELC
260 270 280 290 300
MTAVDLNSAQ KNVNNLVKQI YLDAETMGAM SEELSATVEE ITSKVITIDE
310 320 330 340 350
ATKEINKGIE EFSASTEELN ASVEEVNSSI EELATSSTEG SNNSNVAKGK
360 370 380 390 400
AKEVQEYLQD AIKETNSIYE ERQQKIIKAI EDGKVVSEIR VMADSIAQIA
410 420 430 440 450
EQTNLLALNA AIEAARAGEQ GKGFAVVADE IRKLAEQSAE SVLVIKNTIT
460 470 480 490 500
QVQSAFGNLS DNGNQLLDFM NTKVKELLDS SLSVSKQYYD DSDYISTMTE
510 520 530 540 550
NFASMTEEIN ATTNQITGAV QNIALGAQDA AEHTGDILSG IDETTKAMNE
560 570
IAKTSENQAS IAQKLNELVG KFKI
Length:574
Mass (Da):63,994
Last modified:January 9, 2007 - v1
Checksum:i60C14B0E43992AB1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000382 Genomic DNA Translation: ABK61393.1
RefSeqiWP_011721287.1, NC_008593.1

Genome annotation databases

EnsemblBacteriaiABK61393; ABK61393; NT01CX_1196
GeneIDi4540434
KEGGicno:NT01CX_1196
PATRICifig|386415.7.peg.307

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000382 Genomic DNA Translation: ABK61393.1
RefSeqiWP_011721287.1, NC_008593.1

3D structure databases

ProteinModelPortaliA0PY27
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi386415.NT01CX_1196

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK61393; ABK61393; NT01CX_1196
GeneIDi4540434
KEGGicno:NT01CX_1196
PATRICifig|386415.7.peg.307

Phylogenomic databases

eggNOGiENOG4105C8Q Bacteria
COG0840 LUCA
HOGENOMiHOG000055361
OMAiEIRIMAE
OrthoDBiPOG091H0QRR

Enzyme and pathway databases

BioCyciCNOV386415:G1G6M-326-MONOMER

Family and domain databases

CDDicd06225 HAMP, 1 hit
InterProiView protein in InterPro
IPR004090 Chemotax_Me-accpt_rcpt
IPR003660 HAMP_dom
IPR024478 HlyB_4HB_MCP
IPR004089 MCPsignal_dom
PfamiView protein in Pfam
PF12729 4HB_MCP_1, 1 hit
PF00015 MCPsignal, 1 hit
PRINTSiPR00260 CHEMTRNSDUCR
SMARTiView protein in SMART
SM00304 HAMP, 1 hit
SM00283 MA, 1 hit
PROSITEiView protein in PROSITE
PS50111 CHEMOTAXIS_TRANSDUC_2, 1 hit
PS50885 HAMP, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0PY27_CLONN
AccessioniPrimary (citable) accession number: A0PY27
Entry historyiIntegrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: June 20, 2018
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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