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UniProtKB - A0PXV2 (RS3_CLONN)
Protein
30S ribosomal protein S3
Gene
rpsC
Organism
Clostridium novyi (strain NT)
Status
Functioni
Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.
UniRule annotationGO - Molecular functioni
- mRNA binding Source: UniProtKB-UniRule
- rRNA binding Source: UniProtKB-UniRule
- structural constituent of ribosome Source: InterPro
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 30S ribosomal protein S3UniRule annotation |
Gene namesi | Name:rpsCUniRule annotation Ordered Locus Names:NT01CX_1121 |
Organismi | Clostridium novyi (strain NT) |
Taxonomic identifieri | 386415 [NCBI] |
Taxonomic lineagei | Bacteria › Firmicutes › Clostridia › Eubacteriales › Clostridiaceae › Clostridium › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000293775 | 1 – 221 | 30S ribosomal protein S3Add BLAST | 221 |
Interactioni
Subunit structurei
Part of the 30S ribosomal subunit.
Forms a tight complex with proteins S10 and S14.
UniRule annotationProtein-protein interaction databases
STRINGi | 386415.NT01CX_1121 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 39 – 108 | KH type-2UniRule annotationAdd BLAST | 70 |
Sequence similaritiesi
Belongs to the universal ribosomal protein uS3 family.UniRule annotation
Phylogenomic databases
eggNOGi | COG0092, Bacteria |
HOGENOMi | CLU_058591_0_2_9 |
OMAi | KTNPIGN |
OrthoDBi | 1132353at2 |
Family and domain databases
Gene3Di | 3.30.1140.32, 1 hit 3.30.300.20, 1 hit |
HAMAPi | MF_01309_B, Ribosomal_S3_B, 1 hit |
InterProi | View protein in InterPro IPR004087, KH_dom IPR015946, KH_dom-like_a/b IPR004044, KH_dom_type_2 IPR009019, KH_sf_prok-type IPR005704, Ribosomal_S3_bac-typ IPR001351, Ribosomal_S3_C IPR036419, Ribosomal_S3_C_sf IPR018280, Ribosomal_S3_CS |
Pfami | View protein in Pfam PF07650, KH_2, 1 hit PF00189, Ribosomal_S3_C, 1 hit |
SMARTi | View protein in SMART SM00322, KH, 1 hit |
SUPFAMi | SSF54814, SSF54814, 1 hit SSF54821, SSF54821, 1 hit |
TIGRFAMsi | TIGR01009, rpsC_bact, 1 hit |
PROSITEi | View protein in PROSITE PS50823, KH_TYPE_2, 1 hit PS00548, RIBOSOMAL_S3, 1 hit |
i Sequence
Sequence statusi: Complete.
A0PXV2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MGQKVHPHGL RVGVIKDWDA KWYANSQNFA DNLIEDDKIR KFVKKRSYSA
60 70 80 90 100
GIAKIEIERT AKRVKINIHT GKPGMIIGKG GKGIEELKSE ILKMIKEKNV
110 120 130 140 150
IINIVEVKRP ETDAQLMAEN VAQQLEKRIS FRRAMKQTIQ RAMRSGAKGV
160 170 180 190 200
KTACSGRLGG AEIARTEQYH EGTIPLQTLR ADIDYGFAEA DTTYGKIGVK
210 220
VWLYKGEVLP TKKVRTEEIS Q
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CP000382 Genomic DNA Translation: ABK61321.1 |
RefSeqi | WP_011721221.1, NC_008593.1 |
Genome annotation databases
EnsemblBacteriai | ABK61321; ABK61321; NT01CX_1121 |
KEGGi | cno:NT01CX_1121 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CP000382 Genomic DNA Translation: ABK61321.1 |
RefSeqi | WP_011721221.1, NC_008593.1 |
3D structure databases
SMRi | A0PXV2 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 386415.NT01CX_1121 |
Genome annotation databases
EnsemblBacteriai | ABK61321; ABK61321; NT01CX_1121 |
KEGGi | cno:NT01CX_1121 |
Phylogenomic databases
eggNOGi | COG0092, Bacteria |
HOGENOMi | CLU_058591_0_2_9 |
OMAi | KTNPIGN |
OrthoDBi | 1132353at2 |
Family and domain databases
Gene3Di | 3.30.1140.32, 1 hit 3.30.300.20, 1 hit |
HAMAPi | MF_01309_B, Ribosomal_S3_B, 1 hit |
InterProi | View protein in InterPro IPR004087, KH_dom IPR015946, KH_dom-like_a/b IPR004044, KH_dom_type_2 IPR009019, KH_sf_prok-type IPR005704, Ribosomal_S3_bac-typ IPR001351, Ribosomal_S3_C IPR036419, Ribosomal_S3_C_sf IPR018280, Ribosomal_S3_CS |
Pfami | View protein in Pfam PF07650, KH_2, 1 hit PF00189, Ribosomal_S3_C, 1 hit |
SMARTi | View protein in SMART SM00322, KH, 1 hit |
SUPFAMi | SSF54814, SSF54814, 1 hit SSF54821, SSF54821, 1 hit |
TIGRFAMsi | TIGR01009, rpsC_bact, 1 hit |
PROSITEi | View protein in PROSITE PS50823, KH_TYPE_2, 1 hit PS00548, RIBOSOMAL_S3, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | RS3_CLONN | |
Accessioni | A0PXV2Primary (citable) accession number: A0PXV2 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 10, 2007 |
Last sequence update: | January 9, 2007 | |
Last modified: | February 23, 2022 | |
This is version 78 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Ribosomal proteins
Ribosomal proteins families and list of entries - SIMILARITY comments
Index of protein domains and families