>sp|A0MD28-2|RPOA_PRRSS Isoform Replicase polyprotein 1a of Replicase polyprotein 1ab OS=Porcine reproductive and respiratory syndrome virus (isolate Pig/United States/SD 01-08/2001) OX=857306
MSGTFSRCMCTPAARVFWNAGQVFCTRCLSARPLLSPELQDTDLGVVGLFYKPKDKIHWK
VPIGIPQVECTPSGCCWLSAVFPLARMTSGNHNFLQRLVKVADVLYRDGCLAPRHLRELQ
VYERGCSWYPITGPVPGMGLFANSMHVSDQPFPGATHVLTNSPLPQRACRQPFCPFEEAH
SDVYRWKKFVIFTDSSPNGRFRMMWTPESDDSAALEVLPPELERQVEILTRSFPAHHPIN
LADWELTESPENGFSFGTSHSCGHIVQNPNVFDGKCWLTCFLGQSAEVCYHEEHLANALG
YQTKWGVHGKYLQRRLQVRGMRAVVDPDGPIHVEALSCSQSWVRHLTLNNDVTPGFVRLT
SIRIVSNTEPTAFRIFRFGAHKWYGAAGKRARAKRATKSGKDSALAPKIAPPVPTCGITT
YSPPTDGSCGWHVLAAIVNRMINGDFTSPLPQYNRPEDDWASDYDLAQAIQCLQLPATVV
RNRACPNAKYLIKLNGVHWEVEVRSGMAPRSLSRECVVGVCSEGCVAPPYPADGLPKRAL
EALASAYRLPSDCVSSGIADFLADPPPQEFWTLDKMLTSPSPERSGFSSLYKLLLEVVPQ
KCGATEGAFVYAVERMLKDCPSPEQAMALLAKIKVPSSKAPSVSLDECFPAGVPADFEPA
FQERPRSPGAAVALCSPDAKGFEGTASEEAQESGHKAVHAVPLAEGPNNEQVQVVAGEQL
ELGGCGLAIGSAQSSSDSKRENMHNSREDEPLDLSHPAPAATTTLVGEQTPDNPGSDASA
LPIAVRGFVPTGPILRHVEHCGTESGDSSSPLDLSFAQTLDQPLDLSLAAWPVKATASDP
GWVRGRCEPVFLKPRKAFSDGDSALQFGELSESSSVIEFDQTKDTLVADAPVDLTTSNEA
LSAVDPSEFVELRRPRHSAQALIDRGGPLADVHAKIKNRVYEQCLQACEPGSRATPATRE
WLDKMWDRVDMKTWRCTSQFQAGRILASLKFLPDMIQDTPPPVPRKNRASDNAGLKQLVA
RWDKKLSVTPPPKSAGLVLDQTVPPPTDIQQEDATPSDGLSHASDFSSRVSTSWSWKGLM
LSGTRLAGSAGQRLMTWVFEVYSHLPAFILTLFSPRGSMAPGDWLFAGVVLLALLLCRSY
PILGCLPLLGVFSGSLRRVRLGVFGSWMAFAVFLFSTPSNPVGSSCDHDSPECHAELLAL
EQRQLWEPVRGLVVGPSGLLCVILGKLLGGSRHLWHVILRLCMLTDLALSLVYVVSQGRC
HKCWGKCIRTAPAEVALNVFPFSRATRNSLTSLCDRFQTPKGVDPVHLATGWRGCWRGES
PIHQPHQKPIAYANLDEKKISAQTVVAVPYDPSQAIKCLKVLQAGGAIVDQPTPEVVRVS
EIPFSAPFFPKVPVNPDCRIVVDSDTFVAAVRCGYSTAQLVLGRGNFAKLNQTPLRDSAS
TKTTGGASYTLAVAQVSVWTLVHFILGLWFTSPQVCGRGTADPWCSNPFSYPAYGPGVVC
SSRLCVSADGVTLPLFSAVAQLSGREVGIFILVLVSLTALAHRLALKADMLVVFSAFCAY
AWPMSSWLICFFPILLKWVTLHPLTMLWVHSFLVFCMPAAGILSLGITGLLWAVGRFTQV
AGIITPYDIHQYTSGPRGAAAVATAPEGTYMAAVRRAALTGRTLIFTPSAVGSLLEGAFR
THKPCLNTVNVVGSSLGSGGVFTIDGRKTVVTAAHVLNGDTARVTGDSYNRMHTFKTSGD
YAWSHADDWQGVAPVVKVAKGYRGRAYWQTSTGVEPGVIGEGFAFCFTNCGDSGSPVISE
SGDLIGIHTGSNKLGSGLVTTPEGETCAIKETKLSDLSRHFAGPSVPLGDIKLSPAIVPD
VTSIPSDLASLLASVPVMEGGLSTVQLLCVFFLLWRMMGHAWTPIVAVGFFLLNEILPAV
LVRAVFSFALFILAWATPWSAQVLMIRLLTASLNRNKLSLAFYALGGVVGLAAEIGAFAG
RLPELSQALSTYCFLPRVLAMASYVPIIIIGGLHALGVILWLFKYRCLHNMLVGDGSFSS
AFFLRYFAEGNLRKGVSQSCGMSNESLTAALACKLSQADLDFLSSLTNFKCFVSASNMKN
AAGQYIEAAYAKALRQELASLVQVDKMKGILSKLEAFAETATPSLDAGDVVVLLGQHPHG
SILDINVGTERKTVSVQETRSLGGSKFSVCTVVSNTPVDALTGIPLQTPTPLFENGPRHR
GEEDDLRVERMKKHCVSLGFHNINGKVYCKIWDKSTGDTFYTDDSRYTQDLAFQDRSADY
RDRDYEGVQTAPQQGFDPKSETPIGTVVIGGITYNRYLIKGKEVLVPKPDNCLEAAKLSL
EQALAGMGQTCDLTAAEVEKLRRIISQLQGLTTEQALNC