UniProtKB - A0JPB1 (IGSF3_XENTR)
Protein
Immunoglobulin superfamily member 3
Gene
igsf3
Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Names & Taxonomyi
Protein namesi | Recommended name: Immunoglobulin superfamily member 3Short name: IgSF3 |
Gene namesi | Name:igsf3 |
Organismi | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) |
Taxonomic identifieri | 8364 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Amphibia › Batrachia › Anura › Pipoidea › Pipidae › Xenopodinae › Xenopus › Silurana |
Proteomesi |
|
Organism-specific databases
Xenbasei | XB-GENE-18006038, igsf3 |
Subcellular locationi
Other locations
- Membrane Curated; Single-pass type I membrane protein Curated
Other locations
- integral component of membrane Source: GO_Central
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Topological domaini | 17 – 1091 | ExtracellularSequence analysisAdd BLAST | 1075 | |
Transmembranei | 1092 – 1112 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 1113 – 1161 | CytoplasmicSequence analysisAdd BLAST | 49 |
Keywords - Cellular componenti
MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 16 | Sequence analysisAdd BLAST | 16 | |
ChainiPRO_0000320137 | 17 – 1161 | Immunoglobulin superfamily member 3Add BLAST | 1145 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Disulfide bondi | 39 ↔ 117 | PROSITE-ProRule annotation | ||
Disulfide bondi | 164 ↔ 242 | PROSITE-ProRule annotation | ||
Disulfide bondi | 298 ↔ 372 | PROSITE-ProRule annotation | ||
Disulfide bondi | 428 ↔ 507 | PROSITE-ProRule annotation | ||
Disulfide bondi | 562 ↔ 641 | PROSITE-ProRule annotation | ||
Disulfide bondi | 697 ↔ 775 | PROSITE-ProRule annotation | ||
Disulfide bondi | 831 ↔ 914 | PROSITE-ProRule annotation | ||
Disulfide bondi | 970 ↔ 1047 | PROSITE-ProRule annotation |
Keywords - PTMi
Disulfide bondProteomic databases
PRIDEi | A0JPB1 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 18 – 135 | Ig-like C2-type 1Add BLAST | 118 | |
Domaini | 140 – 258 | Ig-like C2-type 2Add BLAST | 119 | |
Domaini | 272 – 382 | Ig-like C2-type 3Add BLAST | 111 | |
Domaini | 402 – 523 | Ig-like C2-type 4Add BLAST | 122 | |
Domaini | 541 – 651 | Ig-like C2-type 5Add BLAST | 111 | |
Domaini | 674 – 796 | Ig-like C2-type 6Add BLAST | 123 | |
Domaini | 806 – 930 | Ig-like C2-type 7Add BLAST | 125 | |
Domaini | 947 – 1063 | Ig-like C2-type 8Add BLAST | 117 |
Motif
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Motifi | 246 – 248 | EWI motif | 3 |
Keywords - Domaini
Immunoglobulin domain, Repeat, Signal, Transmembrane, Transmembrane helixPhylogenomic databases
InParanoidi | A0JPB1 |
OrthoDBi | 180654at2759 |
Family and domain databases
Gene3Di | 2.60.40.10, 8 hits |
InterProi | View protein in InterPro IPR007110, Ig-like_dom IPR036179, Ig-like_dom_sf IPR013783, Ig-like_fold IPR003599, Ig_sub IPR003598, Ig_sub2 IPR013106, Ig_V-set |
Pfami | View protein in Pfam PF07686, V-set, 4 hits |
SMARTi | View protein in SMART SM00409, IG, 8 hits SM00408, IGc2, 5 hits SM00406, IGv, 7 hits |
SUPFAMi | SSF48726, SSF48726, 8 hits |
PROSITEi | View protein in PROSITE PS50835, IG_LIKE, 7 hits |
i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
A0JPB1-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MGTAALLILL AGVSWAQREV AIQPGPLYRA EGSQISIWCN VRGYQGPSEQ
60 70 80 90 100
NFLWSIYLPT APEKEIQIVG TNDPSFSYAI YSQRVRSGGI YVERVSGDRA
110 120 130 140 150
LLHIRQLQDQ DTGEYECHTP NTDPSYHGSY SAKVNLQVIP DTLTVSSPAQ
160 170 180 190 200
TIQKVEGGSL QVTCEVSQNS SRHTHLSVSW LRLSEGEATE IISVTQNFSV
210 220 230 240 250
RPGPSYAQKH SVGDVRLDKV GDSTFRLTLY NLHPSDQGDI YCEGTEWIQD
260 270 280 290 300
PDGTWFPLTQ KRSEGTSVTV LPTDKEFNVR LETERRTYNG GDTATLRCII
310 320 330 340 350
EAQNPGDRLF AVSWAFNSSL IASQSPGGVP SLTGEYARRE DGGELRVGKD
360 370 380 390 400
SDSVFSLKIF RLRPEDSGKY NCRVTERERG PSGELIDRES KRPKNIPISV
410 420 430 440 450
LPLRTSLTVT VTANSSSVLE GVRLSLSCSV ASLAGPQSRV SASWHLQDKQ
460 470 480 490 500
GRQRDVVRQD RDGVTWAGEQ YRERLGTGGL RLLRSGSDTF SLELEGSQRT
510 520 530 540 550
DAGSYECRVA EWVPAPDGEW QLLGERSAQA NVDILALETG FAVTAITRTP
560 570 580 590 600
GVTYFDSFDL QCILKPHYPP WVGVSVTWRF QPAGGGDTHD LVTFSRSGGV
610 620 630 640 650
QWGERAGSFR GRSIVEKGDS THTVRLSVSR ASDSEAGKYQ CVAELWRRET
660 670 680 690 700
SGMWARLAER ASNLLEIRVQ RPVPRLQVTK VTRTLSVVEG SPVTLSCSIR
710 720 730 740 750
SQSGPDSRFA VLWLVQQPSG AEGKLIGRSD AGTEFGTYPE GALLKGRLQL
760 770 780 790 800
GVTAPGQYAL TLQGARTDDS GSYYCQVEEW AMDPNQAWYR LAEETSGLTE
810 820 830 840 850
IRVRPPDANL QLDQLPRNVS ALEGQSVTVT CHVLNRTLPD SRLSLEWLCW
860 870 880 890 900
RAGHMERRGL ARLTVDGVLG SVEEEPGDVA PGLPSRVQVS QPSLGLYALT
910 920 930 940 950
LRGTEVRDSG TYSCLVQEWL RDPRGQWYRR TEERSGATYV SVRQPDPQLQ
960 970 980 990 1000
LDPSLLNVSV MEGGHFDLDC MVSSRSRPDS QLAISWSLQG TSRGAEPETL
1010 1020 1030 1040 1050
LNVDRSGVWA PLAPRWEGRL QQLQLSPTLF RLHVPRVGPG DSGNYTCLVQ
1060 1070 1080 1090 1100
EWLLGPRGDW YLLAQDEAVI GWIRVQRKES NLQSTICAND ALFYLVFFYP
1110 1120 1130 1140 1150
FPIFGILIIT ILLVRFRHRP TGKPGEGKNG VPLLWIKEPH LNYSPTCLEP
1160
PVLSIHPGTI D
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BC127336 mRNA Translation: AAI27337.1 |
RefSeqi | NP_001090681.1, NM_001097212.1 |
Genome annotation databases
GeneIDi | 100036654 |
KEGGi | xtr:100036654 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BC127336 mRNA Translation: AAI27337.1 |
RefSeqi | NP_001090681.1, NM_001097212.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Proteomic databases
PRIDEi | A0JPB1 |
Genome annotation databases
GeneIDi | 100036654 |
KEGGi | xtr:100036654 |
Organism-specific databases
CTDi | 3321 |
Xenbasei | XB-GENE-18006038, igsf3 |
Phylogenomic databases
InParanoidi | A0JPB1 |
OrthoDBi | 180654at2759 |
Family and domain databases
Gene3Di | 2.60.40.10, 8 hits |
InterProi | View protein in InterPro IPR007110, Ig-like_dom IPR036179, Ig-like_dom_sf IPR013783, Ig-like_fold IPR003599, Ig_sub IPR003598, Ig_sub2 IPR013106, Ig_V-set |
Pfami | View protein in Pfam PF07686, V-set, 4 hits |
SMARTi | View protein in SMART SM00409, IG, 8 hits SM00408, IGc2, 5 hits SM00406, IGv, 7 hits |
SUPFAMi | SSF48726, SSF48726, 8 hits |
PROSITEi | View protein in PROSITE PS50835, IG_LIKE, 7 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | IGSF3_XENTR | |
Accessioni | A0JPB1Primary (citable) accession number: A0JPB1 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | February 26, 2008 |
Last sequence update: | December 12, 2006 | |
Last modified: | December 2, 2020 | |
This is version 53 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |