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Entry version 2 (10 Feb 2021)
Sequence version 1 (02 Dec 2020)
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Protein
Submitted name:

Malonate decarboxylase subunit alpha

Gene

mdcA

Organism
Salmonella diarizonae
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Malonate decarboxylase subunit alphaImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:mdcAImported
ORF Names:G2997_11960Imported, G3A00_00120Imported, GB016_00290Imported, GB034_00120Imported, GB088_00120Imported, GB246_00120Imported, GB337_10780Imported, GBS30_04500Imported, GBX19_00290Imported, GBY15_04160Imported, GBY49_00120Imported, GBZ10_00290Imported, GBZ37_01790Imported, GBZ41_10595Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSalmonella diarizonaeImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri59204 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeSalmonella

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR005777, MadA
IPR037171, NagB/RpiA_transferase-like

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF16957, Mal_decarbox_Al, 1 hit

Superfamily database of structural and functional annotation

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SUPFAMi
SSF100950, SSF100950, 2 hits

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR01110, mdcA, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A6X8JLT4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLSGQTPARV WNTRRNEKQR RLASVPVQGK VLPTADLTAM LEKLIAPGDR
60 70 80 90 100
VVLEGNNQKQ ADFLSRMLAE VNPQKVHDLH MIMPSVGRSE HLDIFEKGIA
110 120 130 140 150
RKLDFSFSGT QSLRISQLLE DGQLEIGAIH TYIELYSRLY VDLAPNVALI
160 170 180 190 200
AGYKADRKGN LYTGPSTEDT PALVEAAAFH DGIVIAQVNE LVDDECDLPR
210 220 230 240 250
VDIPGSWIDY VVVADKPFFI EPLFTRDPRL IKQEHILMAM MAIKGIYAEH
260 270 280 290 300
QVQSLNHGIG FNTAAIELLL PTYGEQLGLK GKICKHWTLN PHPTLIPAIE
310 320 330 340 350
SGWVESVHCF GGELGMEEYI RARPDVFFTG ADGSMRSNRA FCQLAGQYAV
360 370 380 390 400
DMFIGSTLQV DGYANSSTVT RGRLSGFGGA PNMGHDPHGR RHATPAWLNM
410 420 430 440 450
ITEPDPMQRG KKLVVQMVET FQAGVKPTFV EKLDAIDVAK ASGMPLAPVM
460 470 480 490 500
IYGDDVTHVL TEEGIAYLYR AKDLEERRAM VAAVAGITDI GLGVDAKRVA
510 520 530 540 550
ELRSSGKVVY PEDMDIRRTD ATRSLLAAGS VAELRSSGKV VYPEDMDIRR
560 570 580
TDATRSLLAA GSVADLVEWS GGLYNPPAKF RSW
Length:583
Mass (Da):64,125
Last modified:December 2, 2020 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i4623E6F325D2ADEA
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
DAAFWY010000001 Genomic DNA Translation: HAB1844976.1
DAAFXY010000001 Genomic DNA Translation: HAB1976515.1
DAAFYE010000001 Genomic DNA Translation: HAB1989660.1
DAAGBA010000027 Genomic DNA Translation: HAB2325482.1
DAAGPC010000001 Genomic DNA Translation: HAB3976093.1
DAAGQE010000004 Genomic DNA Translation: HAB4098938.1
DAAGTE010000001 Genomic DNA Translation: HAB4454838.1
DAAGVL010000002 Genomic DNA Translation: HAB4718225.1
DAAGVM010000039 Genomic DNA Translation: HAB4724213.1
DAAGXW010000001 Genomic DNA Translation: HAB5015063.1
DAAHAQ010000019 Genomic DNA Translation: HAB5328960.1
DAAHFA010000001 Genomic DNA Translation: HAB5839310.1
DAAQZS010000001 Genomic DNA Translation: HAE1472458.1
DAAQZP010000025 Genomic DNA Translation: HAE1595384.1

NCBI Reference Sequences

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RefSeqi
WP_053507949.1, NZ_JZTR01000005.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAFWY010000001 Genomic DNA Translation: HAB1844976.1
DAAFXY010000001 Genomic DNA Translation: HAB1976515.1
DAAFYE010000001 Genomic DNA Translation: HAB1989660.1
DAAGBA010000027 Genomic DNA Translation: HAB2325482.1
DAAGPC010000001 Genomic DNA Translation: HAB3976093.1
DAAGQE010000004 Genomic DNA Translation: HAB4098938.1
DAAGTE010000001 Genomic DNA Translation: HAB4454838.1
DAAGVL010000002 Genomic DNA Translation: HAB4718225.1
DAAGVM010000039 Genomic DNA Translation: HAB4724213.1
DAAGXW010000001 Genomic DNA Translation: HAB5015063.1
DAAHAQ010000019 Genomic DNA Translation: HAB5328960.1
DAAHFA010000001 Genomic DNA Translation: HAB5839310.1
DAAQZS010000001 Genomic DNA Translation: HAE1472458.1
DAAQZP010000025 Genomic DNA Translation: HAE1595384.1
RefSeqiWP_053507949.1, NZ_JZTR01000005.1

3D structure databases

Database of comparative protein structure models

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ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Family and domain databases

InterProiView protein in InterPro
IPR005777, MadA
IPR037171, NagB/RpiA_transferase-like
PfamiView protein in Pfam
PF16957, Mal_decarbox_Al, 1 hit
SUPFAMiSSF100950, SSF100950, 2 hits
TIGRFAMsiTIGR01110, mdcA, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A6X8JLT4_SALDZ
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A6X8JLT4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: December 2, 2020
Last sequence update: December 2, 2020
Last modified: February 10, 2021
This is version 2 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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