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Entry version 4 (07 Apr 2021)
Sequence version 1 (07 Oct 2020)
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Protein
Submitted name:

tRNA nuclease WapA

Gene

wapA

Organism
Bacillus subtilis (strain 168)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
tRNA nuclease WapAImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:wapAImported
ORF Names:HIR78_22375Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBacillus subtilis (strain 168)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri224308 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

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SMRi
A0A6M4JQQ0

Database of comparative protein structure models

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ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.120.260, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR008979, Galactose-bd-like_sf
IPR022385, Rhs_assc_core
IPR031325, RHS_repeat
IPR006530, YD

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05593, RHS_repeat, 4 hits

Superfamily database of structural and functional annotation

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SUPFAMi
SSF49785, SSF49785, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR03696, Rhs_assc_core, 1 hit
TIGR01643, YD_repeat_2x, 5 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A6M4JQQ0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKKRKRRNFK RFIAAFLVLA LMISLVPADV LAKSTEEENG NRIAADDPEE
60 70 80 90 100
TLQKEQTEEA VPFDPKDINK EGEITSERTE NTKLYYEGDG VYKQEVYLDP
110 120 130 140 150
IHTKETPDAD WEDISPELKE STSKQVETEN AILNSDFQKQ MKNGLYATFE
160 170 180 190 200
HNDHKVTYSL AEAKGPNKTS LTPKDTSADY KTDSNEIVYP DVFPNIDLQT
210 220 230 240 250
FTFNENIKED LVLHQYNGYN TFTFQLKTDL QAKEQEDGSI DFSDEKGKVV
260 270 280 290 300
FSVPKPFMTD SKLDELSGEV ERSDKVSYKL EKNEEGYLLH LTADENWLKD
310 320 330 340 350
PERVYPVSID PSTSLSVSSD TFVMSAYPTT NYSASSQKWD ANLKAYVLKT
360 370 380 390 400
GYYDKTTGTN YAFMKFNNLK PIQNMTVTKA TLKTYVAHSY YGTKATGLWL
410 420 430 440 450
DTVNSNYDNA KVTWNTKPAS KNIGKADVHK GQWASYDVTA AVKSWNSGGA
460 470 480 490 500
NYGFKLHTNG NGKEYWKKLI SSANSANKPY IEVTYTIPKG NTPTIKAYHN
510 520 530 540 550
GDSTGYFDIS WKKVEGAKGY KVWIYNGKEY QAISAGNVTS WSTKGKKIWP
560 570 580 590 600
TSAEIASKRY KLHLDGKDGA ELALDPSPVY KNSGGSYATS KNYWIGVSAI
610 620 630 640 650
FDQGEGAMSA PAKPVIPNVG KAQAPSAKGY NNGNATGYFD LSWKAVSGAT
660 670 680 690 700
GYKVQVFNGK GFETLDLGNQ TSWTTKGKKI WPTSAEIKAG KYALHLKDGS
710 720 730 740 750
GAELPINPGP TYKNAGGDGA KRNYSFKIIA YNKDGEAIAS PAATPALPDI
760 770 780 790 800
ARPKNVTGYL YTNTKSSQTG YVNLIWEKVQ NAKGYKVNIY NGKEYQSFDV
810 820 830 840 850
GDADHWTTQN KNIWPTSEEI KAGSYKLHTD GKGGELALDP SPVYNNANGN
860 870 880 890 900
YKGKKNYSFT LVAYDANGET IPTAPFNPTF HEGAEFLGTE EYWSIIDIPS
910 920 930 940 950
GQLNGATGNV IVNEEDLSID GRGPGLGLSR TYNSLDSSDH LFGQGWYADA
960 970 980 990 1000
ETSVISTDGG AMYIDEDATT HRFTKKADGT YQPPTGVYLE LTETADQFIL
1010 1020 1030 1040 1050
KTKDQTNAYF NKKGGKLQKV VDGHNNATVY TYNDKNQLTA ITDASGRKLT
1060 1070 1080 1090 1100
FTYDENGHVT SITGPKNKKV TYSYENDLLK KVTDTDGTVT SYDYDSEGRL
1110 1120 1130 1140 1150
VKQYSANSTE AKPVFTEYQY SGHRLEKAIN AKKETYVYSY DADKKTLLMT
1160 1170 1180 1190 1200
QPNGRKVQYG YNEAGNPIQV IDDAEGLKIT TNTKYEGNNV VEDVDPNDVG
1210 1220 1230 1240 1250
TGKATESYQY DKDGNVTSVK DAYGTETYEY NKNNDVTKMK DTEGNVTDIA
1260 1270 1280 1290 1300
YDGLDAVSET DQSGKSSSAA VYDKYGNQIQ SSKDLSASTN ILKDGSFEAQ
1310 1320 1330 1340 1350
KSGWNLTASK DSGKISVIAD KSGVLSGSKA LEVLSQSTSA GTDHGYSSAT
1360 1370 1380 1390 1400
QTVELEPNTT YTLSGKIKTD LAKSRAYFNI DLRDKDQKRI QWIHNEYSAL
1410 1420 1430 1440 1450
AGKNDWTKRQ ITFTTPANAG KAVVYMEVDH KDKDGKGKAW FDEVQLEKGE
1460 1470 1480 1490 1500
VSSSYNPVQN SSFTSATENW NVSGASVDSE EGFNDDVSLK AARTSASQAG
1510 1520 1530 1540 1550
SVTKQTVVLG QSANDKPVYL TLTGMSKASS VKFTDEKDYS LQANVTYADG
1560 1570 1580 1590 1600
STGIYNAKFP SGTQEWNRAA VVIPKTKPIN KVDISILFQK SATGTVWFDD
1610 1620 1630 1640 1650
IRLIEGSLLT KSTYDSNGNY VTKEEDELGY ATSTDYDETG KKTSETDAKG
1660 1670 1680 1690 1700
EKTTYTYDQA DQLTNMTLSN GTSILHSYDK EGNEVSKTIR AGADQTYKFE
1710 1720 1730 1740 1750
YDVMGKLVKT TDPLGNVLAS EYDANSNLTK TISPNGNEVS LSYDGTDRVK
1760 1770 1780 1790 1800
SKSYNGTEKY IFTYDKNGNE TSVVNKEQNT TKKRTFDNKN RLTELTDRGG
1810 1820 1830 1840 1850
SQTWTYPSDS DKLKTFSWIH GDQKGTNQFT YNKLDQMIEM KDSTSSYSFD
1860 1870 1880 1890 1900
YDENGNVQTF ITGNGGGTSF SYDERNLVSS LHIGDKNGGD ILTESYEYDA
1910 1920 1930 1940 1950
NGNRTTINSS ASGKVQYEYG KLNQLVKETH EDGTVIEYTY DGFGNRKTVT
1960 1970 1980 1990 2000
TIKDGSSKTV NASFNIMNQL TKVNDESISY DKNGNRTSDG KFTYTWDAED
2010 2020 2030 2040 2050
NLTAVTKKGE DKPFATYKYD EKGNRIQKTV NGKVTNYFYD GDSLNVLYET
2060 2070 2080 2090 2100
DADNNVTKSY TYGDSGQLLS YTENGKKYFY HYNAHGDIIA ISDSTGKTVA
2110 2120 2130 2140 2150
KYQYDAWGNP TKTEASDEVK DNRYRYAGYQ YDEETGLYYL MARYYEPRNG
2160 2170 2180 2190 2200
VFLSLDPDPG SDGDSLDQNG YAYGNNNPVM NVDPDGHWVW LVVNAGFAAY
2210 2220 2230 2240 2250
DGYKAYKSGK GWKGAAWAAA SNFGPGKIFK GASRAYKFTK KAVKITGHTR
2260 2270 2280 2290 2300
HGLNQSIGRN GGRGVNLRAK LNAVRSPKKV IKQPNGATKY VGKKATVVLN
2310 2320 2330
KRGKVITAYG SSRAKGSKHV FHTHGKGNKS KRRR
Length:2,334
Mass (Da):258,162
Last modified:October 7, 2020 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iDAE0897CD279AEB6
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
CP052842 Genomic DNA Translation: QJP90593.1

NCBI Reference Sequences

More...
RefSeqi
NP_391802.2, NC_000964.3
WP_003243665.1, NZ_JNCM01000034.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
937525

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
bsu:BSU39230

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP052842 Genomic DNA Translation: QJP90593.1
RefSeqiNP_391802.2, NC_000964.3
WP_003243665.1, NZ_JNCM01000034.1

3D structure databases

SMRiA0A6M4JQQ0
ModBaseiSearch...

Genome annotation databases

GeneIDi937525
KEGGibsu:BSU39230

Family and domain databases

Gene3Di2.60.120.260, 2 hits
InterProiView protein in InterPro
IPR008979, Galactose-bd-like_sf
IPR022385, Rhs_assc_core
IPR031325, RHS_repeat
IPR006530, YD
PfamiView protein in Pfam
PF05593, RHS_repeat, 4 hits
SUPFAMiSSF49785, SSF49785, 1 hit
TIGRFAMsiTIGR03696, Rhs_assc_core, 1 hit
TIGR01643, YD_repeat_2x, 5 hits

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A6M4JQQ0_BACSU
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A6M4JQQ0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 7, 2020
Last sequence update: October 7, 2020
Last modified: April 7, 2021
This is version 4 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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