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Entry version 5 (29 Sep 2021)
Sequence version 1 (07 Oct 2020)
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Protein
Submitted name:

DNA repair/recombination ATPase SbcE

Gene

sbcE

Organism
Bacillus subtilis (strain 168)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
DNA repair/recombination ATPase SbcEImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:sbcEImported
ORF Names:HIR78_05520Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBacillus subtilis (strain 168)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri224308 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

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SMRi
A0A6M4JGL3

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini5 – 203AAA_27InterPro annotationAdd BLAST199

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili179 – 233Sequence analysisAdd BLAST55
Coiled coili378 – 419Sequence analysisAdd BLAST42
Coiled coili548 – 568Sequence analysisAdd BLAST21
Coiled coili651 – 685Sequence analysisAdd BLAST35
Coiled coili711 – 731Sequence analysisAdd BLAST21
Coiled coili755 – 789Sequence analysisAdd BLAST35

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

Identification of Orthologs from Complete Genome Data

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OMAi
MKEWQGK

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

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Gene3Di
3.40.50.300, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR027417, P-loop_NTPase
IPR038734, YhaN_AAA

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13514, AAA_27, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF52540, SSF52540, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A6M4JGL3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTALRIISLH IYQYGKFSNR TFDFSASPVQ VIYGLNEAGK TTMMSFIESM
60 70 80 90 100
LFGFPKTKKY EPKTGGVYGG VLEAEHPEYG VLKIERTKGT AEKLSVYTEK
110 120 130 140 150
GEVKQGDVLK QLFQGTDRSL YKAIYSFDVF GLQEIHAFNR DKIGEFLLFS
160 170 180 190 200
SLFGAEAVSK LDSRLTKESE RLYKPNGRNP QLNQELETLK QLAVKLKQAE
210 220 230 240 250
AEEAGYHQLL EEKRTLEARL AAAETELKET AGHIRMIEGA IERKPLLNEK
260 270 280 290 300
ATLEQVIAEF PEHAGQFPAD GLHQLEKYES HLHPKSAQLE ALRVKMAELD
310 320 330 340 350
KQRQKLIPDK ELLAKETLIQ ELSAAFHMYQ SWGEQLAAIQ AQLRQTSAQT
360 370 380 390 400
AAGLEQLNKT DENELLNMNT SYDYEWQLQQ AVQQYVQARD RKRQLDETFE
410 420 430 440 450
LARQELEDAE KAVRAASSAI LENSQRKDKE AALRAYDETQ GQHQEQAKLR
460 470 480 490 500
EQLTFFERQQ AKQKKTVIAA GMLFIVLFSL LQQWIPAISF GAALIVYWLV
510 520 530 540 550
SGKSSSRNSR ETRQPMTDIS PAEAEMLREA LWEDDRNKQH LLTQRAALQQ
560 570 580 590 600
KEAAYERVIQ QFEQWEAEMA PSFTQVERFM NELGFKEDPS FLLDAYSLMK
610 620 630 640 650
DVKKEVKKKH ELTIEAGRLK KHRRTFEERV SMLLPVNQSQ DISISDALHT
660 670 680 690 700
LRKNIEREKE IEKQKKEIET DIHYTKEQML ELEQEIQYFH AQIEQLFAAA
710 720 730 740 750
AAKDRDAFFA IAAISRQLKD TENKLHHVNA QLQGGYPEEL ELADSNTLSE
760 770 780 790 800
LKDKQFVENE RKERLTEEIE QLRSQIALLS VKQEQLEASG MVSDLKLQTE
810 820 830 840 850
MQKERVKETA KKWASIQMVK QVIRNKLERH KKIELPRLLE TAGEFFRPLT
860 870 880 890 900
DGNYQTIYFS ETDDSIMVMH RDGTVYHAEE LSQGTCEQLY TAIRFALAVT
910 920 930 940 950
RQGESKLPFQ LDDSFVHFDQ ERLKRVLHVL YDLSEGGRQI LYFTCHEHVK
960
DAFHSSQIIH LVS
Length:963
Mass (Da):111,159
Last modified:October 7, 2020 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i80968FF3AD105347
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP052842 Genomic DNA Translation: QJP87508.1

NCBI Reference Sequences

More...
RefSeqi
NP_388873.1, NC_000964.3
WP_003233256.1, NZ_JNCM01000035.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
936294

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
bsu:BSU09920

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP052842 Genomic DNA Translation: QJP87508.1
RefSeqiNP_388873.1, NC_000964.3
WP_003233256.1, NZ_JNCM01000035.1

3D structure databases

SMRiA0A6M4JGL3
ModBaseiSearch...

Genome annotation databases

GeneIDi936294
KEGGibsu:BSU09920

Phylogenomic databases

OMAiMKEWQGK

Family and domain databases

Gene3Di3.40.50.300, 2 hits
InterProiView protein in InterPro
IPR027417, P-loop_NTPase
IPR038734, YhaN_AAA
PfamiView protein in Pfam
PF13514, AAA_27, 1 hit
SUPFAMiSSF52540, SSF52540, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A6M4JGL3_BACSU
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A6M4JGL3
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 7, 2020
Last sequence update: October 7, 2020
Last modified: September 29, 2021
This is version 5 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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