UniProtKB - A0A6J3IV80 (A0A6J3IV80_SAPAP)
Protein
Submitted name:
protein polybromo-1 isoform X8
Gene
PBRM1
Organism
Sapajus apella (Brown-capped capuchin) (Cebus apella)
Status
Functioni
GO - Molecular functioni
- chromatin binding Source: InterPro
- DNA binding Source: UniProtKB-KW
GO - Biological processi
- chromatin remodeling Source: InterPro
Keywordsi
Biological process | Transcription, Transcription regulationARBA annotation |
Names & Taxonomyi
Protein namesi | Submitted name: protein polybromo-1 isoform X8Imported |
Gene namesi | Name:PBRM1Imported |
Organismi | Sapajus apella (Brown-capped capuchin) (Cebus apella)Imported |
Taxonomic identifieri | 9515 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Platyrrhini › Cebidae › Cebinae › Sapajus |
Proteomesi |
|
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 85 – 155 | BromoInterPro annotationAdd BLAST | 71 | |
Domaini | 221 – 291 | BromoInterPro annotationAdd BLAST | 71 | |
Domaini | 421 – 491 | BromoInterPro annotationAdd BLAST | 71 | |
Domaini | 574 – 644 | BromoInterPro annotationAdd BLAST | 71 | |
Domaini | 712 – 782 | BromoInterPro annotationAdd BLAST | 71 | |
Domaini | 853 – 898 | BromoInterPro annotationAdd BLAST | 46 | |
Domaini | 992 – 1110 | BAHInterPro annotationAdd BLAST | 119 | |
Domaini | 1192 – 1308 | BAHInterPro annotationAdd BLAST | 117 | |
Domaini | 1415 – 1483 | HMG boxInterPro annotationAdd BLAST | 69 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 22 – 59 | DisorderedSequence analysisAdd BLAST | 38 | |
Regioni | 175 – 198 | DisorderedSequence analysisAdd BLAST | 24 | |
Regioni | 508 – 543 | DisorderedSequence analysisAdd BLAST | 36 | |
Regioni | 661 – 682 | DisorderedSequence analysisAdd BLAST | 22 | |
Regioni | 938 – 977 | DisorderedSequence analysisAdd BLAST | 40 | |
Regioni | 1142 – 1169 | DisorderedSequence analysisAdd BLAST | 28 | |
Regioni | 1390 – 1414 | DisorderedSequence analysisAdd BLAST | 25 | |
Regioni | 1467 – 1496 | DisorderedSequence analysisAdd BLAST | 30 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 26 – 42 | PolarSequence analysisAdd BLAST | 17 | |
Compositional biasi | 661 – 675 | PolyampholyteSequence analysisAdd BLAST | 15 | |
Compositional biasi | 938 – 969 | PolyampholyteSequence analysisAdd BLAST | 32 |
Keywords - Domaini
BromodomainPROSITE-ProRule annotationARBA annotationFamily and domain databases
CDDi | cd05515, Bromo_polybromo_V, 1 hit |
Gene3Di | 1.20.920.10, 6 hits 2.30.30.490, 2 hits |
InterProi | View protein in InterPro IPR001025, BAH_dom IPR043151, BAH_sf IPR001487, Bromodomain IPR036427, Bromodomain-like_sf IPR018359, Bromodomain_CS IPR009071, HMG_box_dom IPR036910, HMG_box_dom_sf IPR037968, PBRM1_BD5 IPR037382, Rsc/polybromo |
PANTHERi | PTHR16062, PTHR16062, 2 hits |
Pfami | View protein in Pfam PF01426, BAH, 2 hits PF00439, Bromodomain, 6 hits PF00505, HMG_box, 1 hit |
PRINTSi | PR00503, BROMODOMAIN |
SMARTi | View protein in SMART SM00439, BAH, 2 hits SM00297, BROMO, 6 hits SM00398, HMG, 1 hit |
SUPFAMi | SSF47095, SSF47095, 1 hit SSF47370, SSF47370, 6 hits |
PROSITEi | View protein in PROSITE PS51038, BAH, 2 hits PS00633, BROMODOMAIN_1, 5 hits PS50014, BROMODOMAIN_2, 6 hits PS50118, HMG_BOX_2, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 19 potential isoforms that are computationally mapped.Show allAlign All
A0A6J3IV80-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MRRLAFRGAG CALVKLKKLD SMGSKRRRAT SPSSSVSGDF DDGHHSVSTP
60 70 80 90 100
GPSRKRRRLS NLPTVDPIAV CHELYNTIRD YKDEQGRLLC ELFIRAPKRR
110 120 130 140 150
NQPDYYEVVS QPIDLMKIQQ KLKMEEYDDV NLLTADFQLL FNNAKAYYKP
160 170 180 190 200
DSPEYKAACK LWDLYLRTRN EFVQKGEADD EDDDEDGQDN QGTMTEGSSP
210 220 230 240 250
TYLKEILEQL LEAIVVATNP SGRLISELFQ KLPSKVQYPD YYAIIKEPID
260 270 280 290 300
LKTIAQRIQN GSYKSIHAMA KDIDLLAKNA KTYNEPGSQV FKDANSIKKI
310 320 330 340 350
FYMKKAEIEH HEMAKSSLRM RTPSNLAAAR LTGPSHSKGS LGEERNPTSK
360 370 380 390 400
YYRNKRAVQG GRLSAITMAL QYGSESEEDA ALAAARYEEG ESEAESITSF
410 420 430 440 450
MDVSNPFYQL YDTVRSCRNN QGQLIAEPFF HLPSKKKYPD YYQQIKMPIS
460 470 480 490 500
LQQIRTKLKN QEYETLDHLE CDLNLMFENA KRYNVPNSAI YKRVLKLQQV
510 520 530 540 550
MQAKKKELAR RDDIEDGDSM ISSATSDTGS AKRKRNTHDS EMLGLRRLSS
560 570 580 590 600
KKNIRKQRMK ILFNVVLEAR EPGSGRRLCD LFMVKPSKKD YPDYYKIILE
610 620 630 640 650
PMDLKIIEHN IRNDKYAGEE GMIEDMKLMF RNARHYNEEG SQVYNDAHIL
660 670 680 690 700
EKLLKEKRKE LGPLPDDDDM ASPKLKLSRK SGISPKKSKY MTPMQQKLNE
710 720 730 740 750
VYEAVKNYTD KRGRRLSAIF LRLPSRSELP DYYLTIKKPM DMEKIRSHMM
760 770 780 790 800
ANKYQDIDSM VEDFVMMFNN ACTYNEPESL IYKDALVLHK VLLETRRDLE
810 820 830 840 850
GDEDSHVPNV TLLIQELIHN LFVSVMSHQD DEGRCYSDSL AEIPAVDPNF
860 870 880 890 900
PNKPPLTFDI IRKNVENNRY RRLDLFQEHM FEVLERARRM NRTDSEIYED
910 920 930 940 950
AVELQQFFIK IRDELCKNGE ILLSPALSYT TKHLHNDVEK EKKEKLPKEI
960 970 980 990 1000
EEDKLKREEE KREAEKSEDS SGAAGLSGLH RTYSQDCSFK NSMYHVGDYV
1010 1020 1030 1040 1050
YVEPAEANLQ PHIVCIERLW EDSAGEKWLY GCWFYRPNET FHLATRKFLE
1060 1070 1080 1090 1100
KEVFKSDYYN KVPVSKILGK CVVMFVKEYF KLCPENFRDE DVFVCESRYS
1110 1120 1130 1140 1150
AKTKSFKKIK LWTMPISSVR FVPRDVPLPV VRVASVFANA DKGDDEKNTD
1160 1170 1180 1190 1200
NSEDSRAEDN FNLEKEKEDV PVEMSNGEPG CHYFEQLHYN DMWLKVGDCV
1210 1220 1230 1240 1250
FIKSHGLVRP RVGRIEKVWV RDGAAYFYGP IFIHPEETEH EPTKMFYKKE
1260 1270 1280 1290 1300
VFLSNLEETC PMTCILGKCA VLSFKDFLSC RPTEIPENDI LLCESRYNES
1310 1320 1330 1340 1350
DKQMKKFKGL KRFSLSAKVV DDEIYYFRKP IVPQKEPSPL LEKKIQLLEA
1360 1370 1380 1390 1400
KFAELEGGDD DIEEMGEEDS EAIEPPSLPQ LQTPLASELD LMPYTPPQST
1410 1420 1430 1440 1450
PKSAKGSAKK EGSKRKINMS GYILFSSEMR AVIKAQHPDY SFGELSRLVG
1460 1470 1480 1490 1500
TEWRNLETAK KAEYEERAAK VAEQQERERA AQQQQPSASP RAGTPVGALM
1510 1520 1530 1540 1550
GVVPPPTPMG MLNQQLTPVA GVMNQGVAPM VGTPAPGGSP YGQQVGVLGP
1560 1570 1580 1590 1600
PGQQAPPPYP SPHPAGPPVI QQPTTPMFVA PPPKTQRLLH SEAYLKYIEG
1610 1620 1630 1640 1650
LSAESNSISK WDQTLAARRR DVHLSKEQES RLPSHWLKSK GAHTTMADAL
1660 1670
WRLRDLMLRD TLNIRQAYNL ENV
Computationally mapped potential isoform sequencesi
There are 19 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA0A6J3ITX9 | A0A6J3ITX9_SAPAP | protein polybromo-1 isoform X2 | PBRM1 | 1,724 | Annotation score: | ||
A0A6J3ITZ6 | A0A6J3ITZ6_SAPAP | protein polybromo-1 isoform X9 | PBRM1 | 1,670 | Annotation score: | ||
A0A6J3IU06 | A0A6J3IU06_SAPAP | protein polybromo-1 isoform X16 | PBRM1 | 1,603 | Annotation score: | ||
A0A6J3IU17 | A0A6J3IU17_SAPAP | protein polybromo-1 isoform X3 | PBRM1 | 1,722 | Annotation score: | ||
A0A6J3IU26 | A0A6J3IU26_SAPAP | protein polybromo-1 isoform X6 | PBRM1 | 1,704 | Annotation score: | ||
A0A6J3IU31 | A0A6J3IU31_SAPAP | protein polybromo-1 isoform X10 | PBRM1 | 1,658 | Annotation score: | ||
A0A6J3IU38 | A0A6J3IU38_SAPAP | protein polybromo-1 isoform X14 | PBRM1 | 1,618 | Annotation score: | ||
A0A6J3IU41 | A0A6J3IU41_SAPAP | protein polybromo-1 isoform X17 | PBRM1 | 1,600 | Annotation score: | ||
A0A6J3IUB3 | A0A6J3IUB3_SAPAP | protein polybromo-1 isoform X11 | PBRM1 | 1,655 | Annotation score: | ||
A0A6J3IUC1 | A0A6J3IUC1_SAPAP | protein polybromo-1 isoform X18 | PBRM1 | 1,599 | Annotation score: | ||
There are more potential isoformsShow all |
Sequence databases
RefSeqi | XP_032146025.1, XM_032290134.1 |
Similar proteinsi
Cross-referencesi
Sequence databases
RefSeqi | XP_032146025.1, XM_032290134.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Family and domain databases
CDDi | cd05515, Bromo_polybromo_V, 1 hit |
Gene3Di | 1.20.920.10, 6 hits 2.30.30.490, 2 hits |
InterProi | View protein in InterPro IPR001025, BAH_dom IPR043151, BAH_sf IPR001487, Bromodomain IPR036427, Bromodomain-like_sf IPR018359, Bromodomain_CS IPR009071, HMG_box_dom IPR036910, HMG_box_dom_sf IPR037968, PBRM1_BD5 IPR037382, Rsc/polybromo |
PANTHERi | PTHR16062, PTHR16062, 2 hits |
Pfami | View protein in Pfam PF01426, BAH, 2 hits PF00439, Bromodomain, 6 hits PF00505, HMG_box, 1 hit |
PRINTSi | PR00503, BROMODOMAIN |
SMARTi | View protein in SMART SM00439, BAH, 2 hits SM00297, BROMO, 6 hits SM00398, HMG, 1 hit |
SUPFAMi | SSF47095, SSF47095, 1 hit SSF47370, SSF47370, 6 hits |
PROSITEi | View protein in PROSITE PS51038, BAH, 2 hits PS00633, BROMODOMAIN_1, 5 hits PS50014, BROMODOMAIN_2, 6 hits PS50118, HMG_BOX_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A6J3IV80_SAPAP | |
Accessioni | A0A6J3IV80Primary (citable) accession number: A0A6J3IV80 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | October 7, 2020 |
Last sequence update: | October 7, 2020 | |
Last modified: | April 7, 2021 | |
This is version 4 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |