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Entry version 3 (07 Oct 2020)
Sequence version 1 (17 Jun 2020)
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Protein
Submitted name:

Phage protein

Gene
N/A
Organism
Xanthomonas phage Tenjo
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Phage proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiXanthomonas phage TenjoImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri2674974 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiVirusesDuplodnaviriaHeunggongviraeUroviricotaCaudoviricetesCaudoviralesPodoviridae
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000464863 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome: 1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini20 – 113LPD22InterPro annotationAdd BLAST94

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1406 – 1425DisorderedSequence analysisAdd BLAST20

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1406 – 1421PolyampholyteSequence analysisAdd BLAST16

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR040738, LPD22

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF18834, LPD22, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A679KGH5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGKYSEIIAA TQAEDDQARA RAAGVTAPQV DPDAMGRAMR LADQRGLPPG
60 70 80 90 100
VVADNLPEYD QQQQQDALGD AASASPVLAR WLGDPNHSAL SKDDTGVLAG
110 120 130 140 150
LGRQFNSGLL SAKETLPWLP LPQSALDLDK ERKAAAARGP EMRASPDPSW
160 170 180 190 200
FSEMVGKFQS GWYQGKAGFG LIPLPNLGDA NSRSVEEQVA RGLGYQSAAD
210 220 230 240 250
YDTARTAVYV ADQSRRAQAA DVETAATAAG FQEIADAEKT KDTGKIARAV
260 270 280 290 300
VTNPRAVMAV VAQSLGNTAP QLALSAAMPA SRVVAGVTAG TGSFATEQGM
310 320 330 340 350
TILDVMGDAG VETSDPAAVS AFLRNKPAME KARQKALARG VAVGTFDALT
360 370 380 390 400
AGFAGRLIAN SRRTAVSITG RVAGEAAVQA GGGAAGEATA QLASEGKITS
410 420 430 440 450
QSDIFLEAAA EMPTFLAEGR GQIAEARRAA MHNADRFDAH QEQRAISDLV
460 470 480 490 500
NLASQSKTRE RSATRFESLI RDMTSEGEDT IYLSADGAQR LFQSANSEGG
510 520 530 540 550
PDLGGLVDSD ALREAIATGG EVAIPLAKYA TLVTPELHAA VADQVRLQPG
560 570 580 590 600
GRHDLPAVSS EEIQQAIDQG LAEAQQQDAR ENGPAGQVYD DVVGQLLSRQ
610 620 630 640 650
DEQLARQNAS VVQSVYRNLA ERVGTDAWTL YQQFKLRIPG ATTDTRARPR
660 670 680 690 700
GVDIDVDPFL DALRSGKMPT DREIYGDTLV SALHAAGGLR DSGGELANMD
710 720 730 740 750
AAKARPGLVN NLAGMSLDDA LVWAYQEGFI TQAPTNQQEG AYDADAPDIN
760 770 780 790 800
TLLDMLAQDL GGNPVYRPAA MNAERAAFRD SALGLQDELD QRGIDLQQTD
810 820 830 840 850
NATARQALGY ANRTLEQGQP VESDGVDYAV RDLVAGPSGR PESAATRALV
860 870 880 890 900
DQAVADGDLA KMLQGIATQE GIDADQAALA LRLAEITPDL NVTMVAAPAN
910 920 930 940 950
ANAAGIYNNT TNEIWIHQAV PSVVLHEVLH GVTSAMMTSP TLRRSNTTVA
960 970 980 990 1000
RAVAEFNDLL GAAQAHFAGM ETDGADVPAA LRATLQDPRG PLSNIKELLT
1010 1020 1030 1040 1050
YGMTDKRFQE WLATVPAPAG REESRTAWQW FKDAIATMLG VTGQERTALD
1060 1070 1080 1090 1100
ALIESTSDLV DFAQANPRAA NFAQMSEANR LGVPITDAAA LNQGGEKPRG
1110 1120 1130 1140 1150
AVTFEGVPGA RVFNIELLKG MDASTFMHEM GHVYLEVLND LAARDGAPAQ
1160 1170 1180 1190 1200
ITNDMATLNA WLGREAGTAF TVDQHEQFAR GFEAYLREGK APSSALRRTF
1210 1220 1230 1240 1250
AAFKVWLTAL YRSVRSLNVE LTDDVRNVMD RIVASDAEIE DARAGQYQGA
1260 1270 1280 1290 1300
LIADGMAVGM TFEQLQAYNE AVNTARADAE ATVAAEVLLA ERREQQAWYN
1310 1320 1330 1340 1350
REKREVRAQV LEEVRNLPVY RAQRLLRNGK LPNGDLAPDE LRVKLSKDEL
1360 1370 1380 1390 1400
LDKFGQSFLR NLVGMYSVEG GVRGDEAAAI YGFGSGRELI ESLVNAPRLA
1410 1420 1430 1440 1450
DAVASETEAR MKDRHPDPMT DGTLPDRAMI AAHRDRQADV MVREIRALEQ
1460 1470 1480 1490 1500
HVNGRQVSQA AVIKGVARQI IQDKKLRHLQ PATYRSAEAR AGREAFEAAA
1510 1520 1530 1540 1550
KQDWGNALAA RRRQLLNFEL FREAVRARDE AARTAKYLAK FGETKTRARL
1560 1570 1580 1590 1600
GKAGADYLDQ VDGLLDRFDF RKISDKAADR RSSLATWIEV QAQKGIDVNL
1610 1620 1630 1640 1650
PPKIMDEAFT IPYREMTVAD LATLRDAIRS IDHLARLKGK LLLAGEVRDA
1660 1670 1680 1690 1700
AEVDAAMAAS LAAAHEARPI TTGDRGPKDR LRQAFMQGRV IQATATDMAR
1710 1720 1730 1740 1750
ELDGFKDQGA IWMNTVGVMR DAVNNRLNPA LQQAQDELAQ VYVKHYSKAE
1760 1770 1780 1790 1800
IRGFSERVPM PEVNGDLWSK SRLLGLALNW GNAGNREAIL TQARGRMSPE
1810 1820 1830 1840 1850
QVNALLSKLD SRDWAFVEDV WRLIDSQWPA IADAQKRRTG LVPERVQASA
1860 1870 1880 1890 1900
FTVQTSDGKT LQIPGGYYPL KYESDSVKTM KDEADDFYNS IRTGRTAKAA
1910 1920 1930 1940 1950
TRNGHTIERV GSGGRTVRLD TGVVQQHLRD VLRDVHLGDA VNYVHNVLNG
1960 1970 1980 1990 2000
QEFKEAVDST GTQEYRQALE VWLKDAAAGE IGPRVWHERA MRAARQNFTA
2010 2020 2030 2040 2050
SVLTFKVTSA LLQLSGVVPT IVTIGQGHTM AGIGQYLGKP RAMTRYVREA
2060 2070 2080 2090 2100
SPYMDSRLRT HIEAVQTVMD AEAGRFAAGK AASIRFGYWM IGRVQGLVDT
2110 2120 2130 2140 2150
VTWLAAEQAG MAKFGNDVGR ARAYADDVVT RAQGSGEFID KSPLQRGTLG
2160 2170 2180 2190 2200
DNVRQTEWIK ATTALQGYMI AKGNLAYEQT RKANLRNPRQ AMKWAADMVM
2210 2220 2230 2240 2250
LFSVEGLLTA ALTAKLPNDD DDDGLWDDLG EWAIKDALST FFGVIPGGGV
2260 2270 2280 2290 2300
LVDQFRGYDS SGVVAGAWRA YAELLEKLTP GEDGEVNLDK GVAKAAVSAA
2310 2320 2330 2340
GVTLGLPSTQ VNKTIDAIAA RADGRDVSPY EYLTGPKKEP K
Length:2,341
Mass (Da):252,644
Last modified:June 17, 2020 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC9DAD3BE3EF246F8
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
LR743531 Genomic DNA Translation: CAA2409785.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LR743531 Genomic DNA Translation: CAA2409785.1

3D structure databases

Database of comparative protein structure models

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ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Family and domain databases

InterProiView protein in InterPro
IPR040738, LPD22
PfamiView protein in Pfam
PF18834, LPD22, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A679KGH5_9CAUD
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A679KGH5
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: June 17, 2020
Last sequence update: June 17, 2020
Last modified: October 7, 2020
This is version 3 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteomeImported
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