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UniProtKB - A0A5J4P1U5 (A0A5J4P1U5_9TREM)

Entry version 5 (12 Aug 2020)
Sequence version 1 (11 Dec 2019)
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Protein
Submitted name:

Uncharacterized protein

Gene

DEA37_0013679

Organism
Paragonimus westermani
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:DEA37_0013679Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiParagonimus westermaniImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri34504 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Spiralia › Lophotrochozoa › Platyhelminthes › Trematoda › Digenea › Plagiorchiida › Troglotremata › Troglotrematidae › Paragonimus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000324629 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini656 – 684C2H2-typeInterPro annotationAdd BLAST29
Domaini1464 – 1492C2H2-typeInterPro annotationAdd BLAST29

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni324 – 343DisorderedSequence analysisAdd BLAST20
Regioni603 – 637DisorderedSequence analysisAdd BLAST35
Regioni1094 – 1151DisorderedSequence analysisAdd BLAST58
Regioni1189 – 1233DisorderedSequence analysisAdd BLAST45
Regioni1283 – 1385DisorderedSequence analysisAdd BLAST103
Regioni1512 – 1548DisorderedSequence analysisAdd BLAST37

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1199 – 1224PolarSequence analysisAdd BLAST26
Compositional biasi1283 – 1298PolarSequence analysisAdd BLAST16
Compositional biasi1322 – 1357PolyampholyteSequence analysisAdd BLAST36
Compositional biasi1524 – 1548PolarSequence analysisAdd BLAST25

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR013087, Znf_C2H2_type

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00355, ZnF_C2H2, 6 hits

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS00028, ZINC_FINGER_C2H2_1, 3 hits
PS50157, ZINC_FINGER_C2H2_2, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A5J4P1U5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MMRPVACIFY RCHLCRGSVT THPTSLDLNH GDLALRPGDQ KLTSAESDVQ 
        60         70         80         90        100
QRHSIGVAGS MPRSPYCTLL YGGIIKASNP CAVYSHFAYA HANNKTSWTL 
       110        120        130        140        150
QPSLLSVCPL AESAWNSTTL ELSHSFTTVA EAEPGDPNSG SSNLVLSTIT 
       160        170        180        190        200
ESPESVTTLP GENDADSINM LSNLDHSIFY RPGSELVELW RDLECTVNDI 
       210        220        230        240        250
IPLQELDFLN AKIRPVDLGR SLMLSEFCQS SFAFELEHRA RLNPSPLQRL 
       260        270        280        290        300
YASSETGVTP QLPAPDSPLT QTILHLAQSE VWQSHLFFTN WCQSYVTLAE 
       310        320        330        340        350
PVCPGFPVNP IVIEEVEEDR ASVGAEHDGG CLSTSAALDD VNSDTGDPKL 
       360        370        380        390        400
IGVTSPRSNF GPPPAPQIRA LYEAANLLQS LRGGRLSALF PTDCEPQRHE 
       410        420        430        440        450
QTVTNKSLTP VSQITPGAPS TDECSQVLSL TTSTSANNDP PTMELPSADR 
       460        470        480        490        500
VCTSESTGLL RCLLCRFRTN DPRHLSEHLT GNRPVVPTKC ALCGQSICIR 
       510        520        530        540        550
QPNLCAVKAH LLLHLGYFIM CPQCGFTPPA YLAPDAAELC LRVHLRFVCF 
       560        570        580        590        600
HFNLLQVHVC TQCQGRSKAY HTFAHLCQHM FESHTKRVYA CLWCARQTAG 
       610        620        630        640        650
PNARSASAEP YQTGQTVNSR SANPMEQTEQ SQAIGSDRTP GSLVHLVPAV 
       660        670        680        690        700
DFLCGSQCPH CEEIFERRDS FAQHFRSAHC TSQSGVCCYR CFGSCRRLCF 
       710        720        730        740        750
DLDEFRQHLT SCRCARDLYT STFGACKPRA STTTRFPSMA DRTDNNVSVA 
       760        770        780        790        800
PGDPNLTCRT IANTVREHRL CFCFHCGIGA RRFWSQSRVS GAHSGLLSGS 
       810        820        830        840        850
GTQMGNELCD EGSHSNLAQN DDLFSDAIAT THGVDEVLSS SASSGLKEPQ 
       860        870        880        890        900
YDACYFPDLK ALHAHEYQYH FIQNNSPIAC PWCGHRLSCY RRQEIRMTLN 
       910        920        930        940        950
HLKSHVNHHA FSAWCLERKR KWNKNVRDLP HCFCGAALLD SPLAIISHSS 
       960        970        980        990       1000
AHLLSSDPLK HFASCGICPP EQIYTGLIPN SFSSAVSSRA FASSESSQLS 
      1010       1020       1030       1040       1050
ANVPSNIIRS LRPNSGAHIP CPLDVYRHLR FAVAPELDYY LDHALLISQP 
      1060       1070       1080       1090       1100
FVCPICYAQL STRWALTEHA FTEHWGSLCY ICCRTVNSTA NDPTLKTGVG 
      1110       1120       1130       1140       1150
PMQPLSESAT PTTPDAGLTT TPQPNSCSST IDPPNLSPAD RQSAASRSPL 
      1160       1170       1180       1190       1200
SSSEFAVDGM VSISSTTDNF WLHVFRCLLK RRALLKSARH HSDSQRLPDS 
      1210       1220       1230       1240       1250
KQSTHPGTPV DSLAQSTAKR RPDWRSQNSS SHRCHRLRTK SEYQFIIIST 
      1260       1270       1280       1290       1300
ISSSYLTAVQ RCNNLSSIIT FLDRLANQRH AQSPSPIVIA SSPDSCSPDR 
      1310       1320       1330       1340       1350
EHSSPRSERT VTTAVDSDRT STAATSKRRK RLIIADDETS ETEPYRDEED 
      1360       1370       1380       1390       1400
ESRCGGKGDA DSTTTRPATL DDFDQEIDVE EREDGKKRKI HICSPLSSHQ 
      1410       1420       1430       1440       1450
SEFGGTRCSD TSKSMLCVLC GEQQTTDTWE EHALSHRNPQ MSWNGLNLFE 
      1460       1470       1480       1490       1500
PQRIVLTQRQ SKVYRCYICD RRFVTRFGCQ RHLTGLHKMA KARINWDLLY 
      1510       1520       1530       1540       1550
DNSDSGRIVK TVTDSRRKVP RTSRSTGGHT SSHASHPTSS SKSVNPVDLD 
      1560       1570       1580       1590       1600
RTNHVFSEPC SSVSSELCCY QHEKESDQQL YYCTVCQIPF LSQHSLTIHR 
      1610
TAAHGSSSQS
Length:1,610
Mass (Da):177,995
Last modified:December 11, 2019 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD86772E86BF38D3E
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
QNGE01000127 Genomic DNA Translation: KAA3681791.1

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
QNGE01000127 Genomic DNA Translation: KAA3681791.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Family and domain databases

InterProiView protein in InterPro
IPR013087, Znf_C2H2_type
SMARTiView protein in SMART
SM00355, ZnF_C2H2, 6 hits
PROSITEiView protein in PROSITE
PS00028, ZINC_FINGER_C2H2_1, 3 hits
PS50157, ZINC_FINGER_C2H2_2, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A5J4P1U5_9TREM
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A5J4P1U5
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: December 11, 2019
Last sequence update: December 11, 2019
Last modified: August 12, 2020
This is version 5 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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