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Entry version 3 (31 Jul 2019)
Sequence version 1 (05 Jun 2019)
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Protein
Submitted name:

Pecanex-like protein 3

Gene
N/A
Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Pecanex-like protein 3Imported
Submitted name:
Pecanex-like protein 3 isoform X1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSus scrofa (Pig)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9823 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei218 – 236HelicalSequence analysisAdd BLAST19
Transmembranei243 – 260HelicalSequence analysisAdd BLAST18
Transmembranei280 – 296HelicalSequence analysisAdd BLAST17
Transmembranei308 – 324HelicalSequence analysisAdd BLAST17
Transmembranei330 – 355HelicalSequence analysisAdd BLAST26
Transmembranei367 – 391HelicalSequence analysisAdd BLAST25
Transmembranei403 – 423HelicalSequence analysisAdd BLAST21
Transmembranei477 – 499HelicalSequence analysisAdd BLAST23
Transmembranei505 – 522HelicalSequence analysisAdd BLAST18

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini996 – 1219Pecanex_CInterPro annotationAdd BLAST224

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 48DisorderedSequence analysisAdd BLAST48
Regioni1270 – 1455DisorderedSequence analysisAdd BLAST186

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi15 – 42PolarSequence analysisAdd BLAST28
Compositional biasi1272 – 1291PolarSequence analysisAdd BLAST20
Compositional biasi1319 – 1352Pro-richSequence analysisAdd BLAST34
Compositional biasi1380 – 1410PolarSequence analysisAdd BLAST31

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR039797 Pecanex
IPR007735 Pecanex_C

The PANTHER Classification System

More...
PANTHERi
PTHR12372 PTHR12372, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05041 Pecanex_C, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A480I6K2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLTNSVRRTQ AIRRRHNAGS NPTPPASVMG SPPSSLQEAQ RGRAASHSRA
60 70 80 90 100
LTLPSALHFA SSLLLTRAGA TVHEACTFDD TSEGAVHYFY DESGVRRSYT
110 120 130 140 150
FGLAGGGYEN PVGQQGEQAA NGAWDRHSHS SSFHSTDVPE AAGSLNLLQP
160 170 180 190 200
RPVVLQGMQV RRVPLEIPEE QTLMEEAPPR AQHSYKYWLL PGRWTSVRYE
210 220 230 240 250
RLALLALLDR TRGLVENILG VGLSSLVAFL GYLLLLKGFF TDIWVFQFCL
260 270 280 290 300
VIASCQYSLL KSVQPDAASP MHGHNWVIAY SRPVYFCICC LLIWLLDALG
310 320 330 340 350
SAQPFPPVSL YGLTLFSASF FFCARDVATV FTLCFPFVFL LGLLPQVNTC
360 370 380 390 400
LMYLLEQIDM HGFGGTAATS PLTAVFSLSR SLLAAALLYG FCLGAIKTPW
410 420 430 440 450
PEQHVPVLFS VFCGLLVALS YHLSRQSSDP TVLWSLIRSK LFPELEERSL
460 470 480 490 500
ETARAEPPDP LPDKMRQSVR EVLHSDLVMC VVIAVLTFAI SASTVFIALK
510 520 530 540 550
SVLGFVLYAL AGAVGFFTHY LLPQLRKQLP WFCLSQPVLK PLEYSQYEVR
560 570 580 590 600
GAAQVMWFEK LSAGLQCMEK YLIYPAVVLN ALTVDAHTVV SHPDKFCLYC
610 620 630 640 650
RALLMTVAGL KLLRSAFCCP PQQYLTLAFT VLLFHFDYPR LSQGFLLDYF
660 670 680 690 700
LMSLLCSKLW DLLYKLRFVL TYIAPWQITW GSAFHAFAQP FAVPHSAMLF
710 720 730 740 750
VQALLSALFS TPLNPLLGSA VFIMSYARPL KFWERDYNTK RVDHSNTRLV
760 770 780 790 800
TQLDRNPGAD DNNLNSIFYE HLTRSLQHTL CGDLVLGRWG NYGPGDCFVL
810 820 830 840 850
ASDYLNALVH LIEVGNGLVT FQLRGLEFRG TYCQQREVEA ITEGVEEDEG
860 870 880 890 900
CCCCEPGHLP RVLSFNAAFG QRWLAWEVTA SKYVLEGYSI SDNNAASMLQ
910 920 930 940 950
VFDLRKILIT YYVKSIIYYV SRSPKLEAWL SHEGIATALR PVRAPGYADS
960 970 980 990 1000
DPTFSLSVDE DYDLRLSGLS LPSFCAVHLE WIQYCASRRG QPVDQDWNSP
1010 1020 1030 1040 1050
LVTLCFGLCV LGRRALGTAS HSMSASLEPF LYGLHALFKG DFRITSPRDE
1060 1070 1080 1090 1100
WVFADMDLLH RVVAPGVRMA LKLHQDHFTS PDEYEEPAAL YDAIAANEER
1110 1120 1130 1140 1150
LVISHEGDPA WRSAILSNTP SLLALRHVLD DASDEYKIIM LNRRHLSFRV
1160 1170 1180 1190 1200
IKVNRECVRG LWAGQQQELV FLRNRNPERG SIQNAKQALR NMINSSCDQP
1210 1220 1230 1240 1250
LGYPIYVSPL TTSLAGSHPQ LRALWGGPVS LGAIARWLLH SWERLHKGCG
1260 1270 1280 1290 1300
AGCNSGGNVD DSDCGGGGGG SGLTSLASNP PLAQPTPENT AGGGDQPLPP
1310 1320 1330 1340 1350
GPAWGPRPSL SGSGDGRPPP LLQWPPPRLP GPSPASPAPT EGPRPSRPPG
1360 1370 1380 1390 1400
PGLLSSEGPS GKWSLGGRKG LGGSEGEPAS GSPKGSTPKS QAPLDLSLSP
1410 1420 1430 1440 1450
DINTDASPSR AAQDFPCLDG SAAESGTPTG ALGDWPAPAE ERESPAAQPL

LEHQY
Length:1,455
Mass (Da):159,738
Last modified:June 5, 2019 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD251A8B41A39A365
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
DQIR01076879 Transcribed RNA Translation: HDA32355.1
DQIR01076880 Transcribed RNA Translation: HDA32356.1
DQIR01246848 Transcribed RNA Translation: HDC02326.1
DQIR01247748 Transcribed RNA Translation: HDC03226.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQIR01076879 Transcribed RNA Translation: HDA32355.1
DQIR01076880 Transcribed RNA Translation: HDA32356.1
DQIR01246848 Transcribed RNA Translation: HDC02326.1
DQIR01247748 Transcribed RNA Translation: HDC03226.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Family and domain databases

InterProiView protein in InterPro
IPR039797 Pecanex
IPR007735 Pecanex_C
PANTHERiPTHR12372 PTHR12372, 1 hit
PfamiView protein in Pfam
PF05041 Pecanex_C, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A480I6K2_PIG
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A480I6K2
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: June 5, 2019
Last sequence update: June 5, 2019
Last modified: July 31, 2019
This is version 3 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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