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UniProtKB - A0A341V0Y6 (A0A341V0Y6_WHEAT)

Entry version 10 (02 Dec 2020)
Sequence version 1 (10 Oct 2018)
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Protein

Expansin-like CBD domain-containing protein

Gene
N/A
Organism
Triticum aestivum (Wheat)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Expansin-like CBD domain-containing proteinInterPro annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiTriticum aestivum (Wheat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri4565 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › BOP clade › Pooideae › Triticodae › Triticeae › Triticinae › Triticum
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000019116 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unplaced

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

SecretedARBA annotation

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 22Sequence analysisAdd BLAST22
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_502457711323 – 118Expansin-like CBD domain-containing proteinSequence analysisAdd BLAST96

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini36 – 116Expansin-like CBDInterPro annotationAdd BLAST81

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the expansin family. Expansin B subfamily.ARBA annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		2.60.40.760, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR005453, Allergen_Lolp2
IPR007117, Expansin_CBD
IPR036749, Expansin_CBD_sf

Pfam protein domain database

More...Pfami		View protein in Pfam
PF01357, Expansin_C, 1 hit

Protein Motif fingerprint database; a protein domain database

More...PRINTSi		PR01637, LOLP2ALLERGN

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF49590, SSF49590, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50843, EXPANSIN_CBD, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A341V0Y6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASSSRMLTV VVLAALFAGA MAVKVKLTVQ KGSDKKKLAL KIDYTRPNDS 
        60         70         80         90        100
LSEVELRQHG SEEWQPLTKK GDVWEVSCSK PLVGPFNFRF LSKNGMKNVF 
       110 
DEVFSTDFKI GKTYQPEY
Length:118
Mass (Da):13,265
Last modified:October 10, 2018 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i5F9EE70AA704861C
GO

Genome annotation databases

Ensembl plant genome annotation project

More...EnsemblPlantsi		TraesCS4D02G355300.1; TraesCS4D02G355300.1.cds1; TraesCS4D02G355300
TraesCS4D02G355500.1; TraesCS4D02G355500.1.cds1; TraesCS4D02G355500

Gramene; a comparative resource for plants

More...Gramenei		TraesCAD_scaffold_019913_01G000200.1; TraesCAD_scaffold_019913_01G000200.1; TraesCAD_scaffold_019913_01G000200
TraesCAD_scaffold_019913_01G000400.1; TraesCAD_scaffold_019913_01G000400.1; TraesCAD_scaffold_019913_01G000400
TraesCLE_scaffold_014915_01G000200.1; TraesCLE_scaffold_014915_01G000200.1; TraesCLE_scaffold_014915_01G000200
TraesCLE_scaffold_014915_01G000400.1; TraesCLE_scaffold_014915_01G000400.1; TraesCLE_scaffold_014915_01G000400
TraesCS4D02G355300.1; TraesCS4D02G355300.1.cds1; TraesCS4D02G355300
TraesCS4D02G355500.1; TraesCS4D02G355500.1.cds1; TraesCS4D02G355500
TraesPAR_scaffold_095809_01G000200.1; TraesPAR_scaffold_095809_01G000200.1; TraesPAR_scaffold_095809_01G000200
TraesPAR_scaffold_116684_01G000100.1; TraesPAR_scaffold_116684_01G000100.1; TraesPAR_scaffold_116684_01G000100
TraesROB_scaffold_110288_01G000200.1; TraesROB_scaffold_110288_01G000200.1; TraesROB_scaffold_110288_01G000200
TraesROB_scaffold_120371_01G000100.1; TraesROB_scaffold_120371_01G000100.1; TraesROB_scaffold_120371_01G000100
TraesWEE_scaffold_126862_01G000200.1; TraesWEE_scaffold_126862_01G000200.1; TraesWEE_scaffold_126862_01G000200

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Genome annotation databases

EnsemblPlantsiTraesCS4D02G355300.1; TraesCS4D02G355300.1.cds1; TraesCS4D02G355300
TraesCS4D02G355500.1; TraesCS4D02G355500.1.cds1; TraesCS4D02G355500
GrameneiTraesCAD_scaffold_019913_01G000200.1; TraesCAD_scaffold_019913_01G000200.1; TraesCAD_scaffold_019913_01G000200
TraesCAD_scaffold_019913_01G000400.1; TraesCAD_scaffold_019913_01G000400.1; TraesCAD_scaffold_019913_01G000400
TraesCLE_scaffold_014915_01G000200.1; TraesCLE_scaffold_014915_01G000200.1; TraesCLE_scaffold_014915_01G000200
TraesCLE_scaffold_014915_01G000400.1; TraesCLE_scaffold_014915_01G000400.1; TraesCLE_scaffold_014915_01G000400
TraesCS4D02G355300.1; TraesCS4D02G355300.1.cds1; TraesCS4D02G355300
TraesCS4D02G355500.1; TraesCS4D02G355500.1.cds1; TraesCS4D02G355500
TraesPAR_scaffold_095809_01G000200.1; TraesPAR_scaffold_095809_01G000200.1; TraesPAR_scaffold_095809_01G000200
TraesPAR_scaffold_116684_01G000100.1; TraesPAR_scaffold_116684_01G000100.1; TraesPAR_scaffold_116684_01G000100
TraesROB_scaffold_110288_01G000200.1; TraesROB_scaffold_110288_01G000200.1; TraesROB_scaffold_110288_01G000200
TraesROB_scaffold_120371_01G000100.1; TraesROB_scaffold_120371_01G000100.1; TraesROB_scaffold_120371_01G000100
TraesWEE_scaffold_126862_01G000200.1; TraesWEE_scaffold_126862_01G000200.1; TraesWEE_scaffold_126862_01G000200

Family and domain databases

Gene3Di2.60.40.760, 1 hit
InterProiView protein in InterPro
IPR005453, Allergen_Lolp2
IPR007117, Expansin_CBD
IPR036749, Expansin_CBD_sf
PfamiView protein in Pfam
PF01357, Expansin_C, 1 hit
PRINTSiPR01637, LOLP2ALLERGN
SUPFAMiSSF49590, SSF49590, 1 hit
PROSITEiView protein in PROSITE
PS50843, EXPANSIN_CBD, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A341V0Y6_WHEAT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A341V0Y6
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 10, 2018
Last sequence update: October 10, 2018
Last modified: December 2, 2020
This is version 10 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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