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Entry version 4 (31 Jul 2019)
Sequence version 1 (10 Oct 2018)
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Protein
Submitted name:

CLIP-associating protein 2 isoform X1

Gene

CLASP2

Organism
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
CLIP-associating protein 2 isoform X1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CLASP2Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiNeophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri1706337 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaCetaceaOdontocetiPhocoenidaeNeophocaena
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000252040 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Genome assembly

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini7 – 232TOGInterPro annotationAdd BLAST226
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati168 – 206HEATPROSITE-ProRule annotationAdd BLAST39
Domaini317 – 550TOGInterPro annotationAdd BLAST234
Domaini1280 – 1516TOGInterPro annotationAdd BLAST237

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni244 – 294DisorderedSequence analysisAdd BLAST51
Regioni547 – 601DisorderedSequence analysisAdd BLAST55
Regioni637 – 700DisorderedSequence analysisAdd BLAST64
Regioni718 – 794DisorderedSequence analysisAdd BLAST77
Regioni829 – 857DisorderedSequence analysisAdd BLAST29
Regioni1107 – 1157DisorderedSequence analysisAdd BLAST51
Regioni1181 – 1225DisorderedSequence analysisAdd BLAST45

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1289 – 1313Sequence analysisAdd BLAST25

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi669 – 700PolarSequence analysisAdd BLAST32
Compositional biasi718 – 764PolarSequence analysisAdd BLAST47
Compositional biasi835 – 857PolarSequence analysisAdd BLAST23
Compositional biasi1187 – 1202PolyampholyteSequence analysisAdd BLAST16

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.10.10, 4 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR024395 CLASP_N_dom
IPR021133 HEAT_type_2
IPR034085 TOG

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF12348 CLASP_N, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01349 TOG, 3 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371 SSF48371, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50077 HEAT_REPEAT, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A341BC15-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEPRCMEYFS AQVQQKDVGG RLQVGQELLL YLGVPGAIPD LEEDLGCVGK
60 70 80 90 100
TVDALTGWVG SSNYRVSLMG LEILSAFVDR LSTRFKSYVA MVIVALIDRM
110 120 130 140 150
GDAKDKVRDE AQTLILKLMD QVAPPMYIWE QLASGFKHKN FRSREGVCLC
160 170 180 190 200
LIETLNIFGA QPLVLSKLVP HLCILFGDSN SQVRDAAILA VVEIYRHVGE
210 220 230 240 250
KVRVDLYKRG IPLARLEMIL GKFDEVQNSG GVILSACKDK SFDDEESVDG
260 270 280 290 300
NRPSSAASAF KVPAPKTSGN PVNSARKPGS AGGPKVGGAS KEGGAGAVDE
310 320 330 340 350
DDFIKAFTDV PSIQIYSSRE LEETLNKIRE ILSDDKHDWD QRANALKKIR
360 370 380 390 400
SLLVAGAAQY DCFFQHLRLL DGALKLSAKD LRSQVVREAC ITVAHLSTVL
410 420 430 440 450
GNKFDHGAEA IVPTLFNLVP NSAKVMATSG CAAIRFIIRH THVPRLIPLI
460 470 480 490 500
TSNCTSKSVP VRRRSFEFLD LLLQEWQTHS LERHAAVLVE TIKKGIHDAD
510 520 530 540 550
AEARVEARKT YMGLRNHFPG EAETLYNSLE PSYQKSLQTY LKSSGSVASL
560 570 580 590 600
PQSDRSSSSS QESLNRPFSS KWSTANPSTV AGRVSAGSSK ASSLPGSLQR
610 620 630 640 650
SRSDIDVNAA AGAKAHHAAG QSVRSGRLGA GALNPGSYAS LEDTSDKMDG
660 670 680 690 700
TASEDGRVRA KLSAPLASMG NAKTDSRGRS RTKMVSQSQP GSRSGSPGRV
710 720 730 740 750
LTTTALSTVS SGVQRVLVNS ASTQKRSKIP RSQGCSREAS PSRLSVARSS
760 770 780 790 800
RIPRPSVSQG CSREASRESS RDTSPVRSFQ PLGPGYGISQ SSRLSSSVSA
810 820 830 840 850
MRVLNTGSDV EEAVADALKK PARRRYESYG MHSDDDANSD ASSACSERSY
860 870 880 890 900
SSRNGSIPTY MRQTEDVAEV LNRCASSNWS ERKEGLLGLQ NLLKNQRTLS
910 920 930 940 950
RVELKRLCEI FTRMFADPHG KRVFSMFLET LVDFIQVHKD DLQDWLFVLL
960 970 980 990 1000
TQLLKKMGAD LLGSVQAKVQ KALDVTRESF PNDLQFNILM RFTVDQTQTP
1010 1020 1030 1040 1050
SLKTVKPALR DQLHSFWSSK VKVAILKYIE TLAKQMDPGD FINSSETRLA
1060 1070 1080 1090 1100
VSRVITWTTE PKSSDVRKAA QSVLISLFEL NTPEFTMLLG ALPKTFQDGA
1110 1120 1130 1140 1150
TKLLHNHLRN TGNGTQGSMG SPLTRPTPRS PANWSSPLTS PTNTSQNTLS
1160 1170 1180 1190 1200
PSAFDYDTEN MNSEDIYSSL RGVTEAIQNF SFRSQEDMNE PLKRDSKKDE
1210 1220 1230 1240 1250
GDSTCGGPGM SDPRAGGDAT DSSQTALDNK TSLLHSMPAH SSPRSRDYNP
1260 1270 1280 1290 1300
YNYSDSISPF NKSALKEAMF DDDADQFPDD LSLDHSDLVA ELLKELSNHN
1310 1320 1330 1340 1350
ERVEERKIAL YELMKLTQEE SFSVWDEHFK TILLLLLETL GDKEPTIRAL
1360 1370 1380 1390 1400
ALKVLREILR HQPARFKNYA ELTVMKTLEA HKDPHKEVVR SAEEAASVLA
1410 1420 1430 1440 1450
TSISPEQCIK VLCPIIQTAD YPINLAAIKM QTKVIERVSK ETLNLLLPEI
1460 1470 1480 1490 1500
MPGLIQGYDN SESSVRKACV FCLVAVHAVI GDELKPHLSQ LTGSKMKLLN
1510 1520
LYIKRAQTGS GGADPTTDVS GQS
Length:1,523
Mass (Da):166,831
Last modified:October 10, 2018 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iE699C68504DAA632
GO

Sequence databases

NCBI Reference Sequences

More...
RefSeqi
XP_024599222.1, XM_024743454.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

RefSeqiXP_024599222.1, XM_024743454.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.25.10.10, 4 hits
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR024395 CLASP_N_dom
IPR021133 HEAT_type_2
IPR034085 TOG
PfamiView protein in Pfam
PF12348 CLASP_N, 2 hits
SMARTiView protein in SMART
SM01349 TOG, 3 hits
SUPFAMiSSF48371 SSF48371, 2 hits
PROSITEiView protein in PROSITE
PS50077 HEAT_REPEAT, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A341BC15_9CETA
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A341BC15
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 10, 2018
Last sequence update: October 10, 2018
Last modified: July 31, 2019
This is version 4 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health

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