Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 6 (11 Dec. 2019)
Sequence version 1 (10 Oct. 2018)
Previous versions | rss
Help videoAdd a publicationFeedback
Protein
Submitted name:

CSON001603 protein

Gene

CSON001603

Organism
Culicoides sonorensis (Biting midge)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
CSON001603 proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CSON001603Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCulicoides sonorensis (Biting midge)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri179676 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraNematoceraChironomoideaCeratopogonidaeCeratopogoninaeCulicoidesMonoculicoides

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni90 – 203DisorderedSequence analysisAdd BLAST114
Regioni229 – 263DisorderedSequence analysisAdd BLAST35
Regioni303 – 354DisorderedSequence analysisAdd BLAST52
Regioni533 – 556DisorderedSequence analysisAdd BLAST24
Regioni791 – 815DisorderedSequence analysisAdd BLAST25
Regioni1004 – 1079DisorderedSequence analysisAdd BLAST76
Regioni1201 – 1226DisorderedSequence analysisAdd BLAST26
Regioni1477 – 1519DisorderedSequence analysisAdd BLAST43
Regioni1583 – 1609DisorderedSequence analysisAdd BLAST27
Regioni1625 – 1667DisorderedSequence analysisAdd BLAST43

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1433 – 1453Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi100 – 170PolarSequence analysisAdd BLAST71
Compositional biasi171 – 192PolyampholyteSequence analysisAdd BLAST22
Compositional biasi229 – 243PolarSequence analysisAdd BLAST15
Compositional biasi244 – 263PolyampholyteSequence analysisAdd BLAST20
Compositional biasi308 – 354PolarSequence analysisAdd BLAST47
Compositional biasi1478 – 1519PolarSequence analysisAdd BLAST42
Compositional biasi1583 – 1597PolarSequence analysisAdd BLAST15
Compositional biasi1625 – 1666PolarSequence analysisAdd BLAST42

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

Identification of Orthologs from Complete Genome Data

More...
OMAi
TISEGHH

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A336ML01-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLIIFFSYIQ QAQQQRGTAK YVANPDYNPH IPGLDPVNVE DFIDPLAHNN
60 70 80 90 100
RVRSANRRSG SSLDYLFDIQ ESAEFEPTKG SRKRATYIFD QDSKGSDTQT
110 120 130 140 150
KRIFRGTNKY DPFSTQTSLT RKITESTEVG VDSNSKGSSS RGEKQISPPS
160 170 180 190 200
VRRNVVTNNF NKNRRQPSLK SNSRNNDKKE RVESRSFKDE ASTVKPQTRQ
210 220 230 240 250
YFSNRKFNRN GFAEAKVTST TLAPSITIYR RTRTQGTNER RPATTRKSFS
260 270 280 290 300
KSRESRELEN VEDENYPEAF KALIKSRSKS ESNDAPNKVE PSIKAKVTFR
310 320 330 340 350
LRKTRDKTST TTTTTPSSIS SNIKNNKFTR NGNHKVLFPT RKSSPRTTTT
360 370 380 390 400
TTQSTRFNYD NENSFQTTQP SSDFNYDDIS SNTQFPSVQN TLKSPFLTKN
410 420 430 440 450
KAKIPIDSFT IGPGKKQMAA PQENPVTPSV FKYSTRFRSD GSKKSPIYVP
460 470 480 490 500
TVPPLITQSK LDVNSNNNKN DDEILNDLEH IPFPSKLIDS RIEAELVEAS
510 520 530 540 550
SSVTVSIFGA LSEILSQTTE SSFQNSSLIT NSSSTLKSTT STTSTTTTTT
560 570 580 590 600
TTTTSTVPPL SIIKDSNLKV FSNSTENSSS SGSTLSPTTI VDSNYAANTL
610 620 630 640 650
AYSYMTTTNV HKNNTHSINN FTHSTISEII STTMINNNNF TENEIDSTTI
660 670 680 690 700
PSIESETLPI VMVRNVNTNG NEFNISAQRS LPSLMIPNIL STIQTSTEIP
710 720 730 740 750
ITTTLSDSET STIEMTTISD ETTTVLEMYS NMTNTNSSEM GLNQNNLTNI
760 770 780 790 800
TDLTPNTKNN ITEEINVTTT TTETYIPRFM NRMTILPLTT KSTTITDPPP
810 820 830 840 850
VTETQPMSSS TAQTVTSTTK KSNFKKDFVI YAILPNNSVA IKYPTVESEE
860 870 880 890 900
EVDKERSVYG ILPNNTMIKR YPNGTMRMVN KARNIVITDI NPRDLWNPNS
910 920 930 940 950
YVYRMMHKLP TTTTNPTTVT TTESESTTIK MEKDEEIMNS TAIIDLLTKN
960 970 980 990 1000
SYQQDGELKS DHIFRIKSKG DKSKSVNVPQ DVMVVYPTQM MKEQETDSLN
1010 1020 1030 1040 1050
DINASFNTES SIPTTASSTS LPKSTLGQTR TVMTTSSTQF PVYSPETSPA
1060 1070 1080 1090 1100
QNEISQSTST ENSEPSTTES NTVIIDKSTE SSIEDFSNRI ENNFELRSSV
1110 1120 1130 1140 1150
TTEVPFTTTT QKPESTFARI RETTFMSPIS TDTTTNRITT PIRSQETTKL
1160 1170 1180 1190 1200
LPVEKTTEKP IQTTTVRYST ITGEFSSSSE SLKELQNILI QRTTEVAGKS
1210 1220 1230 1240 1250
TISHLSTTTS TMRPSTTTVK STTARRTKPK VTTIKPRTTT YSDEEDASFL
1260 1270 1280 1290 1300
NNLIKYLNGG GTATTRRPRT KSTETTSTFR TTNPILPSKA PYMILKDFVP
1310 1320 1330 1340 1350
STLPAIEPTE SEIVTLPTLI QTTSKRPVTP TVTFASINDE TKFLEEVRQY
1360 1370 1380 1390 1400
AKLATFKPAT EKSNLSPNDL PGQLAVARGG KAADISSLIK NNIDFSTEPN
1410 1420 1430 1440 1450
VKELTVDELL ASVTKPKIQS TTTTRKPKPI TSLKEFAKQQ KEHQNDLKML
1460 1470 1480 1490 1500
DADLKLLSAL LGRPITIAEI PSLVGQLGRG TAPTTISPAP KRSSVARRPT
1510 1520 1530 1540 1550
TTQSTTTTQS TTLATESTSS YEESLKVIEQ IKLESTSQIA PDFYGKSNEA
1560 1570 1580 1590 1600
KIAAILRQQG IGPENNNIPI EEILEQIALN PNRPITTTTT TTTTRRPRPR
1610 1620 1630 1640 1650
RPPTREPRPI LDGLAWLWRT WQDTAPRGSS RPTSSAFTSE PQTYNQILGS
1660 1670 1680 1690 1700
GGFQSASIPQ QPSSQDDFED FKFEDETETE NAAPSFAPGG GQLITAAIGV
1710 1720 1730
SRAISSFLGA ALQGAARQFR SVWSPTNAPV YDLSAGR
Length:1,737
Mass (Da):192,267
Last modified:October 10, 2018 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iDCA589955BCD6AF0
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
UFQS01001255 Genomic DNA Translation: SSX09956.1
UFQT01001255 Genomic DNA Translation: SSX29679.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
UFQS01001255 Genomic DNA Translation: SSX09956.1
UFQT01001255 Genomic DNA Translation: SSX29679.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Phylogenomic databases

OMAiTISEGHH

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A336ML01_CULSO
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A336ML01
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 10, 2018
Last sequence update: October 10, 2018
Last modified: December 11, 2019
This is version 6 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again