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Entry version 6 (11 Dec 2019)
Sequence version 1 (10 Oct 2018)
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Protein
Submitted name:

CSON010301 protein

Gene

CSON010301

Organism
Culicoides sonorensis (Biting midge)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
CSON010301 proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CSON010301Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCulicoides sonorensis (Biting midge)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri179676 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraNematoceraChironomoideaCeratopogonidaeCeratopogoninaeCulicoidesMonoculicoides

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 30DisorderedSequence analysisAdd BLAST30
Regioni87 – 199DisorderedSequence analysisAdd BLAST113
Regioni230 – 261DisorderedSequence analysisAdd BLAST32
Regioni304 – 350DisorderedSequence analysisAdd BLAST47
Regioni527 – 550DisorderedSequence analysisAdd BLAST24
Regioni783 – 807DisorderedSequence analysisAdd BLAST25
Regioni904 – 924DisorderedSequence analysisAdd BLAST21
Regioni1219 – 1246DisorderedSequence analysisAdd BLAST28
Regioni1495 – 1543DisorderedSequence analysisAdd BLAST49
Regioni1606 – 1632DisorderedSequence analysisAdd BLAST27
Regioni1648 – 1692DisorderedSequence analysisAdd BLAST45

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1451 – 1471Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi87 – 171PolarSequence analysisAdd BLAST85
Compositional biasi172 – 190PolyampholyteSequence analysisAdd BLAST19
Compositional biasi242 – 261PolyampholyteSequence analysisAdd BLAST20
Compositional biasi1496 – 1543PolarSequence analysisAdd BLAST48
Compositional biasi1606 – 1620PolarSequence analysisAdd BLAST15
Compositional biasi1648 – 1689PolarSequence analysisAdd BLAST42

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

Identification of Orthologs from Complete Genome Data

More...
OMAi
MAAPHEN

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A336M575-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSRDHPQHAQ QQRGTAKYVA NPDYNPHIPG LNPVNVEDFI DPLAHNNRVR
60 70 80 90 100
SANRRSGSSL DYLFDIQESA EFEPTKGSRK RATYIFDQDS KGSNTQTKRI
110 120 130 140 150
FRGTNKYDPF STQTSLTRKI TESTEVGVDS NSKGSSSRGE KQISPPSVRR
160 170 180 190 200
NVVTNNFINK NRRPLTLKSN SRNNDNKERV ESRSSKDETS TVKPPTRQYF
210 220 230 240 250
ATRKFNRNGF AEAKVTSTTL APSITIYRRT RTQGTNERRP ATTRKSFSKS
260 270 280 290 300
RESRELENVE DENYPEAFKA LIKSRSKSES NDAPNKVEPS IKAKVTFRLR
310 320 330 340 350
KTRNKTSTTT TTPSSISSNI KNNKFTRNGN HKVLFPTRRS SPRTTSTTES
360 370 380 390 400
TRFNYDNENL IQTTQPSSDY DDISSNTQFP SVQNTLKSPF LTKNKAKIPI
410 420 430 440 450
DSFTIGPGKK QMAAPHENPV TPSVFKYSSR FRSDGSKKSP IYVPTVPPLT
460 470 480 490 500
TQSKLDVNSN NNKNDDEILN DLEHIPFPSK LIDSRIEAEL VEASSSVTVS
510 520 530 540 550
IFGALSEILS QTTESSFQNS SLITNSSSTL KSTTSTTSTT TTTTTTTTST
560 570 580 590 600
VPPLSIIKDS NLKVFSNSTE NSSSSGSTLS PTTIVDSNYA ANTLAYSYMT
610 620 630 640 650
TTNVHKNNTH SINNFTHSTI SEIISTTMIN NNNFNESETD STTIPSIESE
660 670 680 690 700
TVPIVMVRNV NTNGNEFNIS AQRSLPSLMI PVILSTIQTS TEIPITNTLS
710 720 730 740 750
DSETSTIEMT TISDETTTFL EMYSNMTNTN SSEMGLNQNN LTNITDLTPN
760 770 780 790 800
TKNNITEEIN VTTTETYIPR FMNRMTILPL TTKSTKITDP PPLTETQPMS
810 820 830 840 850
SSTAQTVTST TKKSNFKKDF VIYAILPNNS VAIKYPTVES EEEVDKERSV
860 870 880 890 900
YGILPNNTMI KRYPNGTMRM VNKARNIVIT DINPRDLWNP NSYVYRMMHK
910 920 930 940 950
LPTKTTTTSP TTVTTTTTQS EKTTTMKMQE DEEIMNSTAI IDLLTKNSYQ
960 970 980 990 1000
QDGELKSDHI FRIKSKGDKS KSVNVPQDVM VVYPTQLMKE QETDSLNDIN
1010 1020 1030 1040 1050
ASFNTESSIP TTASSTSLPK STLGQTKTVI TTSTTQFPVY SPETTSYQKE
1060 1070 1080 1090 1100
ISQRTSTENF EPSTTEFNTV IIDKSTEPKT VMVSKSTEPN TVIIYKSTES
1110 1120 1130 1140 1150
SIEDFSNRIE NNFELRSSIT TEVPFTTTQK PESTFARIRE TTFMSPISTD
1160 1170 1180 1190 1200
STTNRITTPI RSQETTKLLP VEKTTEKPIQ TTTVRYSTIT GEFSSSSESL
1210 1220 1230 1240 1250
KELQNILIQR TTEVAGKSTI SHLSTTTSTM RPSTTTVKST TARRTKPKVT
1260 1270 1280 1290 1300
TIKPRTTTYS DEEDASFLNN LIKYLNGGGT ATTRRPRTKS TETTSTFRTT
1310 1320 1330 1340 1350
NPILPSKAPY MILKDFVPST LPAIEPTESE IVTLPTSIQT TSKRPVTPTV
1360 1370 1380 1390 1400
TFASINDETK FLEEVRQYAK LATFKPATEK SNLSPNDLPG QLAVARGGKA
1410 1420 1430 1440 1450
ADISSLVKNN IDFSTEPNVK ELTVDELLAS VTKPKIQSTT TTRKPKPITS
1460 1470 1480 1490 1500
LKEFAKQQKE HQNDLKMLDN DLKLLSALLG RPITIAEIPS LVGQLGRGTA
1510 1520 1530 1540 1550
PTTISPVPKR SSVARRPTTT QSTTTQSTTT TQSTTLATES TSSYEESLKV
1560 1570 1580 1590 1600
IEQIKLESTT KIAPDFYGKS NEAKIAAILR QQGIGPENNN IPIEELLEQI
1610 1620 1630 1640 1650
ALNPNRPITT TTTTTTTRRP RPRRPPTREP RPILDGLAWL WRTWQDTAPR
1660 1670 1680 1690 1700
GSSRPTSSAF TSEPQTYNQI LGSGGFQSAS VPQQPSSQDD FDDFKFEDET
1710 1720 1730 1740 1750
ETENAAPSFA PGGGQLITAA IGVSRAISSF LGAALQGAAR QFRSVWSPTN
1760
SPVYDLSAGR
Length:1,760
Mass (Da):194,946
Last modified:October 10, 2018 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC86837FD8E235E98
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
UFQT01000415 Genomic DNA Translation: SSX24103.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
UFQT01000415 Genomic DNA Translation: SSX24103.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Phylogenomic databases

OMAiMAAPHEN

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A336M575_CULSO
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A336M575
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 10, 2018
Last sequence update: October 10, 2018
Last modified: December 11, 2019
This is version 6 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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