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Protein
Submitted name:

zinc finger protein 160-like isoform X1

Gene

LOC111818980

Organism
Trichechus manatus latirostris (Florida manatee)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
zinc finger protein 160-like isoform X1Imported
Gene namesi
Name:LOC111818980Imported
OrganismiTrichechus manatus latirostris (Florida manatee)Imported
Taxonomic identifieri127582 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaAfrotheriaSireniaTrichechidaeTrichechus
Proteomesi
  • UP000248480 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 79KRABInterPro annotationAdd BLAST72
Domaini221 – 251C2H2-typeInterPro annotationAdd BLAST31
Domaini252 – 279C2H2-typeInterPro annotationAdd BLAST28
Domaini280 – 307C2H2-typeInterPro annotationAdd BLAST28
Domaini308 – 335C2H2-typeInterPro annotationAdd BLAST28
Domaini336 – 363C2H2-typeInterPro annotationAdd BLAST28
Domaini364 – 391C2H2-typeInterPro annotationAdd BLAST28
Domaini392 – 419C2H2-typeInterPro annotationAdd BLAST28
Domaini420 – 447C2H2-typeInterPro annotationAdd BLAST28
Domaini448 – 475C2H2-typeInterPro annotationAdd BLAST28
Domaini476 – 503C2H2-typeInterPro annotationAdd BLAST28
Domaini504 – 531C2H2-typeInterPro annotationAdd BLAST28
Domaini532 – 559C2H2-typeInterPro annotationAdd BLAST28
Domaini559 – 586C2H2-typeInterPro annotationAdd BLAST28
Domaini615 – 642C2H2-typeInterPro annotationAdd BLAST28
Domaini643 – 670C2H2-typeInterPro annotationAdd BLAST28
Domaini671 – 698C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

CDDicd07765 KRAB_A-box, 1 hit
InterProiView protein in InterPro
IPR001909 KRAB
IPR036051 KRAB_dom_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF01352 KRAB, 1 hit
PF00096 zf-C2H2, 13 hits
SMARTiView protein in SMART
SM00349 KRAB, 1 hit
SM00355 ZnF_C2H2, 16 hits
SUPFAMiSSF109640 SSF109640, 1 hit
SSF57667 SSF57667, 9 hits
PROSITEiView protein in PROSITE
PS50805 KRAB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 14 hits
PS50157 ZINC_FINGER_C2H2_2, 16 hits

Sequencei

Sequence statusi: Complete.

A0A2Y9RFA8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTLSQELLTF RDVAIEFSQE EWDCLDPTQR TLYRDVMLEN YRNLVSLGVS
60 70 80 90 100
PSEMNIICIL KKETEPWTVE KTMKLANNSD VFSPCVITEL SPKEIIDKGE
110 120 130 140 150
LFQRVILERN ESHGIKDFHF SQVRGNMHEF ESQWRDDEGN NNGVTTACNE
160 170 180 190 200
IFSVRDQHVK RHAGNEYMTC FKNTIELSFQ SHVYEMQKFH TGEKIYECHQ
210 220 230 240 250
LETSINIGSA VPSLQRIPPS FQRNISNECR EVFMHPSWFL QHQKTHSREK
260 270 280 290 300
PYKCNECGKT FNWGSNRNKH QRIHTGEKPY KCNICGKVFT QRSSLKSHQI
310 320 330 340 350
IHSREKPYQC NECGKEFIRK LSLIEHQRTH SGEKPYKCNE CGKAFTRKSG
360 370 380 390 400
LLKHKKIHTG EKPYKCNECG KNFSSPSVLW NHKKIHTGEQ KYKCNECGKA
410 420 430 440 450
FKWGSNLTRH QRIHTVGKPY KCDTCDKAFS HPASLIAHQR CHTGERPFKC
460 470 480 490 500
IECGKAFTQK SGLVEHQRTH SKEKPYKCNE CGKSFGSRSV FRKHKIIHTG
510 520 530 540 550
ESPYKCIECG KAFSERLRLE EHQRIHSGEK PYKCNECGKA FTRKSGLLEH
560 570 580 590 600
QQVHGEKPYK CKECDKSFTR KSGLLEHQRF HNGEKFYQSS EYGSAFYSPS
610 620 630 640 650
VLWDHNNIHT EEEDYRCNEC GKYFKWGSNL TRHQRIHTGE KRYKCNICDM
660 670 680 690
GFIRREGLTA HQRIHAGENN YKYTECGKAF NWGSKLTEHQ RIHTVEKP
Length:698
Mass (Da):81,638
Last modified:September 12, 2018 - v1
Checksum:i3A5BF8F9BFBE784C
GO

Sequence databases

RefSeqiXP_023592156.1, XM_023736388.1

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_023592156.1, XM_023736388.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

CDDicd07765 KRAB_A-box, 1 hit
InterProiView protein in InterPro
IPR001909 KRAB
IPR036051 KRAB_dom_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF01352 KRAB, 1 hit
PF00096 zf-C2H2, 13 hits
SMARTiView protein in SMART
SM00349 KRAB, 1 hit
SM00355 ZnF_C2H2, 16 hits
SUPFAMiSSF109640 SSF109640, 1 hit
SSF57667 SSF57667, 9 hits
PROSITEiView protein in PROSITE
PS50805 KRAB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 14 hits
PS50157 ZINC_FINGER_C2H2_2, 16 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2Y9RFA8_TRIMA
AccessioniPrimary (citable) accession number: A0A2Y9RFA8
Entry historyiIntegrated into UniProtKB/TrEMBL: September 12, 2018
Last sequence update: September 12, 2018
Last modified: October 10, 2018
This is version 2 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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