Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

HLA class I histocompatibility antigen, B-7 alpha chain-like isoform X3

Gene

LOC101347138

Organism
Trichechus manatus latirostris (Florida manatee)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Submitted name:
HLA class I histocompatibility antigen, B-7 alpha chain-like isoform X3Imported
Gene namesi
Name:LOC101347138Imported
OrganismiTrichechus manatus latirostris (Florida manatee)Imported
Taxonomic identifieri127582 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaAfrotheriaSireniaTrichechidaeTrichechus
Proteomesi
  • UP000248480 Componenti: Genome assembly

Subcellular locationi

    Topology

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Transmembranei319 – 341HelicalSequence analysisAdd BLAST23

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Signal peptidei1 – 19Sequence analysisAdd BLAST19
    ChainiPRO_501603438420 – 367Sequence analysisAdd BLAST348

    Keywords - PTMi

    Disulfide bondSAAS annotation

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Domaini213 – 301Ig-likeInterPro annotationAdd BLAST89

    Sequence similaritiesi

    Belongs to the MHC class I family.UniRule annotation

    Keywords - Domaini

    SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

    Family and domain databases

    Gene3Di2.60.40.10, 1 hit
    3.30.500.10, 1 hit
    InterProiView protein in InterPro
    IPR007110 Ig-like_dom
    IPR036179 Ig-like_dom_sf
    IPR013783 Ig-like_fold
    IPR003006 Ig/MHC_CS
    IPR003597 Ig_C1-set
    IPR011161 MHC_I-like_Ag-recog
    IPR037055 MHC_I-like_Ag-recog_sf
    IPR011162 MHC_I/II-like_Ag-recog
    IPR001039 MHC_I_a_a1/a2
    PfamiView protein in Pfam
    PF07654 C1-set, 1 hit
    PF00129 MHC_I, 1 hit
    PRINTSiPR01638 MHCCLASSI
    SMARTiView protein in SMART
    SM00407 IGc1, 1 hit
    SUPFAMiSSF48726 SSF48726, 1 hit
    SSF54452 SSF54452, 1 hit
    PROSITEiView protein in PROSITE
    PS50835 IG_LIKE, 1 hit
    PS00290 IG_MHC, 1 hit

    Sequencei

    Sequence statusi: Complete.

    A0A2Y9QPE0-1 [UniParc]FASTAAdd to basket
    « Hide
            10         20         30         40         50
    MVWALLVQVS LSLLQEARAR SHSLQYFYTA VSEPGPGVPS FTASGFVDDQ
    60 70 80 90 100
    LFIHYDSVEM KAKPCAPWLK EDLDYFDDET KIFTSRMKIF HLNLRNVQKY
    110 120 130 140 150
    YNQTWEHSLK KENTEKSAGP HTLQFTYGCE LRDDGGTMGH WQYGYDGNDY
    160 170 180 190 200
    LSLDMDLLQY TAVSFIARYT KQKWEASGNS IKRDKAYLEK ECIWWLQRYL
    210 220 230 240 250
    ECGRERLTRT EPPRTHVTHH PSPDGKVALR CWALGFYPAE ITLTWQRDGE
    260 270 280 290 300
    DQTQNTELVE TRPSGDGTFQ KWAAVVVPSG EEQRYTCHVQ HEGLSEPFIL
    310 320 330 340 350
    TWEPPFQPTI PVKKQFPSLG LGAVVLTVVI MGAAVAGFAL WRNKSSGTGK
    360
    PGRESINSSV LKAALED
    Length:367
    Mass (Da):41,803
    Last modified:September 12, 2018 - v1
    Checksum:i2AE8FA4F3D85A907
    GO

    Sequence databases

    RefSeqiXP_023581058.1, XM_023725290.1

    Similar proteinsi

    Cross-referencesi

    Sequence databases

    RefSeqiXP_023581058.1, XM_023725290.1

    3D structure databases

    ModBaseiSearch...
    MobiDBiSearch...

    Protocols and materials databases

    Structural Biology KnowledgebaseSearch...

    Family and domain databases

    Gene3Di2.60.40.10, 1 hit
    3.30.500.10, 1 hit
    InterProiView protein in InterPro
    IPR007110 Ig-like_dom
    IPR036179 Ig-like_dom_sf
    IPR013783 Ig-like_fold
    IPR003006 Ig/MHC_CS
    IPR003597 Ig_C1-set
    IPR011161 MHC_I-like_Ag-recog
    IPR037055 MHC_I-like_Ag-recog_sf
    IPR011162 MHC_I/II-like_Ag-recog
    IPR001039 MHC_I_a_a1/a2
    PfamiView protein in Pfam
    PF07654 C1-set, 1 hit
    PF00129 MHC_I, 1 hit
    PRINTSiPR01638 MHCCLASSI
    SMARTiView protein in SMART
    SM00407 IGc1, 1 hit
    SUPFAMiSSF48726 SSF48726, 1 hit
    SSF54452 SSF54452, 1 hit
    PROSITEiView protein in PROSITE
    PS50835 IG_LIKE, 1 hit
    PS00290 IG_MHC, 1 hit
    ProtoNetiSearch...

    Entry informationi

    Entry nameiA0A2Y9QPE0_TRIMA
    AccessioniPrimary (citable) accession number: A0A2Y9QPE0
    Entry historyiIntegrated into UniProtKB/TrEMBL: September 12, 2018
    Last sequence update: September 12, 2018
    Last modified: October 10, 2018
    This is version 2 of the entry and version 1 of the sequence. See complete history.
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported
    UniProt is an ELIXIR core data resource
    Main funding by: National Institutes of Health

    We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

    Do not show this banner again