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Protein
Submitted name:

nuclear cap-binding protein subunit 1 isoform X1

Gene

NCBP1

Organism
Tursiops truncatus (Atlantic bottle-nosed dolphin) (Delphinus truncatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
nuclear cap-binding protein subunit 1 isoform X1Imported
Gene namesi
Name:NCBP1Imported
OrganismiTursiops truncatus (Atlantic bottle-nosed dolphin) (Delphinus truncatus)Imported
Taxonomic identifieri9739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaCetaceaOdontocetiDelphinidaeTursiops
Proteomesi
  • UP000245320 Componenti: Genome assembly

Subcellular locationi

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini28 – 240MIF4GInterPro annotationAdd BLAST213

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili645 – 676Sequence analysisAdd BLAST32
Coiled coili685 – 712Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di1.25.40.180, 4 hits
InterProiView protein in InterPro
IPR016024 ARM-type_fold
IPR027159 CBP80
IPR016021 MIF4-like_sf
IPR015172 MIF4G-like_typ-1
IPR015174 MIF4G-like_typ-2
IPR003890 MIF4G-like_typ-3
PANTHERiPTHR12412 PTHR12412, 1 hit
PfamiView protein in Pfam
PF02854 MIF4G, 1 hit
PF09088 MIF4G_like, 1 hit
PF09090 MIF4G_like_2, 1 hit
SMARTiView protein in SMART
SM00543 MIF4G, 1 hit
SUPFAMiSSF48371 SSF48371, 3 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A0A2U4CG77-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSRRRHSDEN DGGQPHKRRK TSDANETEDH LESLICKVGE KSACSLESNL
60 70 80 90 100
EGLAGVLEAD LPNYKSKILR LLCTVARLLP EKLTIYTTLV GLLNARNYNF
110 120 130 140 150
GGEFVEAMIR QLKESLKANN YNEAVYLVRF LSDLVNCHVI AAPSMVAMFE
160 170 180 190 200
NFVSVTQEED VPQVRRDWYV YAFLSSLPWV GKELYEKKDA EMDRIFANTE
210 220 230 240 250
SYLKRRQKTH VPMLQVWTAE KPHPQEEYLD CLWAQIQKLK KDRWQERHIL
260 270 280 290 300
RPYLAFDSIL CEALQHNLPP FTPPPHTEDS VYPMPRVIFR MFDYTDDPEG
310 320 330 340 350
PVMPGSHSVE RFVIEENLHC IVKSHWKERK TCAAQLVSYP GKNKIPLNYH
360 370 380 390 400
IVEVIFAELF QLPAPPHIDV MYTTLLIELC KLQPGSLPQV LAQATEMLYM
410 420 430 440 450
RLDTMNTTCV DRFINWFSHH LSNFQFRWSW EDWSDCLTQD PESPKPKFVR
460 470 480 490 500
EVLEKCMRLS YHQRILDIVP PTFSALCPAN PTCIYKYGDE SSNSLPGHSV
510 520 530 540 550
ALCLAVAFKS KATNDEIFSI LKDVPNPNQD DDDDEGFSFN PLKIEVFVQT
560 570 580 590 600
LLHLAAKSFS HSFSALAKFH EVFKTLAESD EGKLHVLRVM FEVWRNHPQM
610 620 630 640 650
IAVLVDKMIR TQIVDCAAVA NWIFSSELSR DFTRLFVWEI LHSTIRKMNK
660 670 680 690 700
HVLKIQKELE EAKEKLARQH KRRSDDDDRS SDRKDGALEE QIERLQEKVE
710 720 730 740 750
SAQSEQKNLF LVIFQRFIMI LTEHLVRCET DGTSVLTPWY KNCIERLQQI
760 770 780 790
FLQHHQIIQQ YMVTLENLLF TAELDPHILA VFQQFCALQA
Length:790
Mass (Da):91,825
Last modified:July 18, 2018 - v1
Checksum:iAA2C978B26D55705
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2U4CGB8A0A2U4CGB8_TURTR
nuclear cap-binding protein subunit...
NCBP1
704Annotation score:
A0A2U4CG71A0A2U4CG71_TURTR
nuclear cap-binding protein subunit...
NCBP1
683Annotation score:

Sequence databases

RefSeqiXP_019804439.1, XM_019948880.1

Genome annotation databases

GeneIDi101317466

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_019804439.1, XM_019948880.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi101317466

Family and domain databases

Gene3Di1.25.40.180, 4 hits
InterProiView protein in InterPro
IPR016024 ARM-type_fold
IPR027159 CBP80
IPR016021 MIF4-like_sf
IPR015172 MIF4G-like_typ-1
IPR015174 MIF4G-like_typ-2
IPR003890 MIF4G-like_typ-3
PANTHERiPTHR12412 PTHR12412, 1 hit
PfamiView protein in Pfam
PF02854 MIF4G, 1 hit
PF09088 MIF4G_like, 1 hit
PF09090 MIF4G_like_2, 1 hit
SMARTiView protein in SMART
SM00543 MIF4G, 1 hit
SUPFAMiSSF48371 SSF48371, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2U4CG77_TURTR
AccessioniPrimary (citable) accession number: A0A2U4CG77
Entry historyiIntegrated into UniProtKB/TrEMBL: July 18, 2018
Last sequence update: July 18, 2018
Last modified: October 10, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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