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Protein
Submitted name:

gephyrin isoform X5

Gene

GPHN

Organism
Tursiops truncatus (Atlantic bottle-nosed dolphin) (Delphinus truncatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
gephyrin isoform X5Imported
Gene namesi
Name:GPHNImported
OrganismiTursiops truncatus (Atlantic bottle-nosed dolphin) (Delphinus truncatus)Imported
Taxonomic identifieri9739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaCetaceaOdontocetiDelphinidaeTursiops
Proteomesi
  • UP000245320 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 165MoCF_biosynthInterPro annotationAdd BLAST148
Domaini538 – 681MoCF_biosynthInterPro annotationAdd BLAST144

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili166 – 186Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd00887 MoeA, 1 hit
cd00886 MogA_MoaB, 1 hit
Gene3Di2.40.340.10, 1 hit
3.40.980.10, 2 hits
InterProiView protein in InterPro
IPR036425 MoaB/Mog-like_dom_sf
IPR001453 MoaB/Mog_dom
IPR008284 MoCF_biosynth_CS
IPR038987 MoeA-like
IPR005111 MoeA_C_domain_IV
IPR036688 MoeA_C_domain_IV_sf
IPR005110 MoeA_linker/N
IPR036135 MoeA_linker/N_sf
PANTHERiPTHR10192 PTHR10192, 1 hit
PfamiView protein in Pfam
PF00994 MoCF_biosynth, 2 hits
PF03454 MoeA_C, 1 hit
PF03453 MoeA_N, 1 hit
SMARTiView protein in SMART
SM00852 MoCF_biosynth, 2 hits
SUPFAMiSSF53218 SSF53218, 2 hits
SSF63867 SSF63867, 1 hit
SSF63882 SSF63882, 1 hit
TIGRFAMsiTIGR00177 molyb_syn, 2 hits
PROSITEiView protein in PROSITE
PS01078 MOCF_BIOSYNTHESIS_1, 1 hit
PS01079 MOCF_BIOSYNTHESIS_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 9 potential isoforms that are computationally mapped.Show allAlign All

A0A2U4AAN1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MATEGMILTN HDHQIRVGVL TVSDSCFRNL AEDRSGINLK DLVQDPSLLG
60 70 80 90 100
GTISAYKIVP DEIEEIKETL IDWCDEKELN LILTTGGTGF APRDVTPEAT
110 120 130 140 150
KEVIEREAPG MALAMLMGSL NVTPLGMLSR PVCGIRGKTL IINLPGSKKG
160 170 180 190 200
SQECFQFILP ALPHAIDLLR DAIVKVKEVH DELEDLPSPP PPLSPPPTTS
210 220 230 240 250
PHKQTEDKGV QCEEEEEEKK DSGVASTEDS SSSHITAAAI AAKKHPFYTS
260 270 280 290 300
PAVIMAHGEQ PIPGLISYSH DATGSAEEPI PDSIISRGVQ VLPRDTASLS
310 320 330 340 350
TTPSESPRAQ ATSRLSTASC PTPKVQSRCS SKENILRASH SAVDITKVAR
360 370 380 390 400
RHRMSPFPLT SMDKAFITVL EMTPVLGTEI INYRDGMGRV LAQDVYAKDN
410 420 430 440 450
LPPFPASVKD GYAVRAADGP GDRFIIGESQ AGEQPTQTVM PGQVMRVTTG
460 470 480 490 500
APIPCGADAV VQVEDTELIR ESDDGTEELE VRILVQARPG QDIRPIGHDI
510 520 530 540 550
KRGECVLAKG THMGPSEIGL LATVGVTEVE VNKFPVVAVM STGNELLNPE
560 570 580 590 600
DDLLPGKIRD SNRSTLLATI QEHGYPTINL GIVGDNPDDL LNALNEGISR
610 620 630 640 650
ADVIITSGGV SMGEKDYLKQ VLDIDLHAQI HFGRVFMKPG LPTTFATLDI
660 670 680 690 700
DGVRKIIFAL PGNPVSAVVT CNLFVVPALR KMQGILDPRP TIIKARLSCD
710 720 730 740 750
VKLDPRPEYH RCILTWHHQE PLPWAQSTGN QMSSRLMSMR SANGLLMLPP
760 770
KTEQYVELHK GEVVDVMVIG RL
Length:772
Mass (Da):83,567
Last modified:July 18, 2018 - v1
Checksum:i05695C0A3A2DA476
GO

Computationally mapped potential isoform sequencesi

There are 9 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2U4AAF0A0A2U4AAF0_TURTR
gephyrin isoform X8
GPHN
736Annotation score:
A0A2U4AAZ4A0A2U4AAZ4_TURTR
gephyrin isoform X3
GPHN
785Annotation score:
A0A2U4AAG9A0A2U4AAG9_TURTR
gephyrin isoform X7
GPHN
749Annotation score:
A0A2U4AB42A0A2U4AB42_TURTR
gephyrin isoform X9
GPHN
681Annotation score:
A0A2U4AAS7A0A2U4AAS7_TURTR
gephyrin isoform X10
GPHN
632Annotation score:
A0A2U4AAY0A0A2U4AAY0_TURTR
gephyrin isoform X1
GPHN
804Annotation score:
A0A2U4AAB7A0A2U4AAB7_TURTR
gephyrin isoform X4
GPHN
781Annotation score:
A0A2U4AAL5A0A2U4AAL5_TURTR
gephyrin isoform X2
GPHN
791Annotation score:
A0A2U4AAP0A0A2U4AAP0_TURTR
gephyrin isoform X6
GPHN
755Annotation score:

Sequence databases

RefSeqiXP_019777961.1, XM_019922402.1

Genome annotation databases

GeneIDi101335592

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_019777961.1, XM_019922402.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi101335592

Family and domain databases

CDDicd00887 MoeA, 1 hit
cd00886 MogA_MoaB, 1 hit
Gene3Di2.40.340.10, 1 hit
3.40.980.10, 2 hits
InterProiView protein in InterPro
IPR036425 MoaB/Mog-like_dom_sf
IPR001453 MoaB/Mog_dom
IPR008284 MoCF_biosynth_CS
IPR038987 MoeA-like
IPR005111 MoeA_C_domain_IV
IPR036688 MoeA_C_domain_IV_sf
IPR005110 MoeA_linker/N
IPR036135 MoeA_linker/N_sf
PANTHERiPTHR10192 PTHR10192, 1 hit
PfamiView protein in Pfam
PF00994 MoCF_biosynth, 2 hits
PF03454 MoeA_C, 1 hit
PF03453 MoeA_N, 1 hit
SMARTiView protein in SMART
SM00852 MoCF_biosynth, 2 hits
SUPFAMiSSF53218 SSF53218, 2 hits
SSF63867 SSF63867, 1 hit
SSF63882 SSF63882, 1 hit
TIGRFAMsiTIGR00177 molyb_syn, 2 hits
PROSITEiView protein in PROSITE
PS01078 MOCF_BIOSYNTHESIS_1, 1 hit
PS01079 MOCF_BIOSYNTHESIS_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2U4AAN1_TURTR
AccessioniPrimary (citable) accession number: A0A2U4AAN1
Entry historyiIntegrated into UniProtKB/TrEMBL: July 18, 2018
Last sequence update: July 18, 2018
Last modified: October 10, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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