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Protein
Submitted name:

probable ATP-dependent RNA helicase DDX31 isoform X3

Gene

DDX31

Organism
Tursiops truncatus (Atlantic bottle-nosed dolphin) (Delphinus truncatus)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionHelicaseUniRule annotationImported, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
probable ATP-dependent RNA helicase DDX31 isoform X3Imported
Gene namesi
Name:DDX31Imported
OrganismiTursiops truncatus (Atlantic bottle-nosed dolphin) (Delphinus truncatus)Imported
Taxonomic identifieri9739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaCetaceaOdontocetiDelphinidaeTursiops
Proteomesi
  • UP000245320 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini147 – 176Q_MOTIFInterPro annotationAdd BLAST30
Domaini179 – 360Helicase ATP-bindingInterPro annotationAdd BLAST182
Domaini406 – 585Helicase C-terminalInterPro annotationAdd BLAST180

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi147 – 176Q motifPROSITE-ProRule annotationAdd BLAST30

Sequence similaritiesi

Belongs to the DEAD box helicase family.UniRule annotation

Family and domain databases

CDDicd00079 HELICc, 1 hit
InterProiView protein in InterPro
IPR011545 DEAD/DEAH_box_helicase_dom
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR000629 RNA-helicase_DEAD-box_CS
IPR014014 RNA_helicase_DEAD_Q_motif
PfamiView protein in Pfam
PF00270 DEAD, 1 hit
PF00271 Helicase_C, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS00039 DEAD_ATP_HELICASE, 1 hit
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit
PS51195 Q_MOTIF, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A0A2U4A453-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGWGAAYVVT DGLCWWQEKR SISPLSRSCR VRGFLEIWID IACTLRKQAA
60 70 80 90 100
ATKRKYQASS ETPPAKRRSE ASFLPAKKTA AKETPRTFKG TAQKPFSPKR
110 120 130 140 150
SSAGARDGNP ERKPGIKTSS LFKNNPEIPE LHRPVVKQVQ EKVFTSDAFQ
160 170 180 190 200
ALDLHPHLIS TINTVLKMSS MTSVQKQSIP VLLEGRDALV RSQTGSGKTL
210 220 230 240 250
AYCIPVVQSL QAMKSKIQRG DGPYALILVP TRELALQSFD TVQKLLKPFT
260 270 280 290 300
WIVPGVLMGG EKRKSEKARL RKGINILIAT PGRLVDHIKS TKNIHFRQIQ
310 320 330 340 350
WLILDEADRI LDLGFEKDIT VILNALNAEC QERQNVLLSA TLTEVVLSFS
360 370 380 390 400
RFLQGVTWLA DISLHDPVSI SVLDESHDQS NPKSKAIPEA SPQASDELDS
410 420 430 440 450
FAVPASLEQY VTVVPSKLRL VSLAGFILQK CKFERDQKLI IFFSSCELVD
460 470 480 490 500
FHYNLFLQTL LSGSGALAPG ALPCASTRLK FLRLHGDLEQ EERTAVFQEF
510 520 530 540 550
SHSKTGVLLC TDVAARGLDL PQVTWIVQYN APSSPAEYIH RIGRTARIGC
560 570 580 590 600
HGSSLLILAP SEAEYVNSLA SHKINVSEIK MEDILSVLTR DDCFKGRRWG
610 620 630 640 650
SQLMGSSPSC ASARRQRTPQ KGGLIPGQNE SGGSVTHSAL VVPLQIVNKD
660 670
TWLDPSTQES MEKINSSESP FGHT
Length:674
Mass (Da):74,455
Last modified:July 18, 2018 - v1
Checksum:iDF7C3977E8C6E177
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2U4A472A0A2U4A472_TURTR
RNA helicase
DDX31
747Annotation score:
A0A2U4A4X8A0A2U4A4X8_TURTR
RNA helicase
DDX31
757Annotation score:

Sequence databases

RefSeqiXP_019775766.1, XM_019920207.1

Genome annotation databases

GeneIDi101336786

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_019775766.1, XM_019920207.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi101336786

Family and domain databases

CDDicd00079 HELICc, 1 hit
InterProiView protein in InterPro
IPR011545 DEAD/DEAH_box_helicase_dom
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR000629 RNA-helicase_DEAD-box_CS
IPR014014 RNA_helicase_DEAD_Q_motif
PfamiView protein in Pfam
PF00270 DEAD, 1 hit
PF00271 Helicase_C, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS00039 DEAD_ATP_HELICASE, 1 hit
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit
PS51195 Q_MOTIF, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2U4A453_TURTR
AccessioniPrimary (citable) accession number: A0A2U4A453
Entry historyiIntegrated into UniProtKB/TrEMBL: July 18, 2018
Last sequence update: July 18, 2018
Last modified: November 7, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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