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Protein
Submitted name:

hepatitis A virus cellular receptor 1 isoform X3

Gene

HAVCR1

Organism
Odobenus rosmarus divergens (Pacific walrus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Keywordsi

Molecular functionReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
hepatitis A virus cellular receptor 1 isoform X3Imported
Gene namesi
Name:HAVCR1Imported
OrganismiOdobenus rosmarus divergens (Pacific walrus)Imported
Taxonomic identifieri9708 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaOdobenidaeOdobenus
Proteomesi
  • UP000245340 Componenti: Genome assembly

Subcellular locationi

    Topology

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Transmembranei166 – 185HelicalSequence analysisAdd BLAST20

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Signal peptidei1 – 20Sequence analysisAdd BLAST20
    ChainiPRO_501565023521 – 237Sequence analysisAdd BLAST217

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Domaini6 – 126Ig-likeInterPro annotationAdd BLAST121

    Keywords - Domaini

    Immunoglobulin domainSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

    Family and domain databases

    Gene3Di2.60.40.10, 1 hit
    InterProiView protein in InterPro
    IPR007110 Ig-like_dom
    IPR036179 Ig-like_dom_sf
    IPR013783 Ig-like_fold
    IPR003006 Ig/MHC_CS
    IPR003599 Ig_sub
    IPR013106 Ig_V-set
    PfamiView protein in Pfam
    PF07686 V-set, 1 hit
    SMARTiView protein in SMART
    SM00409 IG, 1 hit
    SUPFAMiSSF48726 SSF48726, 1 hit
    PROSITEiView protein in PROSITE
    PS50835 IG_LIKE, 1 hit
    PS00290 IG_MHC, 1 hit

    Sequence (1+)i

    Sequence statusi: Complete.

    This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

    A0A2U3ZK47-1 [UniParc]FASTAAdd to basket
    « Hide
            10         20         30         40         50
    MTIMQPWVAI SSFILLLTDA VVSYTQVIGV VGHSAMLPCT YSTANGVTTM
    60 70 80 90 100
    CWGRGPCPMS HCSDELVWTD GSHVTVQKHP RYKLKGNILG GNVSLTIENV
    110 120 130 140 150
    AQTDRGLYCC RVEHKGWFND MKLTVSLEIM PDGNGTVTQS SDGLWHSNQT
    160 170 180 190 200
    HVLLAQNPWM TTSKGLYIGI CITAAVLLSV LVVVITKKYL CIRNKLEQLN
    210 220 230
    MVSLNDPRTG ALQSAAEVGV RAEDNIYIIE DNLYVMD
    Length:237
    Mass (Da):26,065
    Last modified:July 18, 2018 - v1
    Checksum:i7E789D29BD941600
    GO

    Computationally mapped potential isoform sequencesi

    There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
    EntryEntry nameProtein names
    Gene namesLengthAnnotation
    A0A2U3W992A0A2U3W992_ODORO
    hepatitis A virus cellular receptor...
    HAVCR1
    299Annotation score:
    A0A2U3W9A5A0A2U3W9A5_ODORO
    hepatitis A virus cellular receptor...
    HAVCR1
    271Annotation score:

    Sequence databases

    RefSeqiXP_012419350.1, XM_012563896.1

    Genome annotation databases

    GeneIDi101379526

    Similar proteinsi

    Cross-referencesi

    Sequence databases

    RefSeqiXP_012419350.1, XM_012563896.1

    3D structure databases

    ModBaseiSearch...
    MobiDBiSearch...

    Protocols and materials databases

    Structural Biology KnowledgebaseSearch...

    Genome annotation databases

    GeneIDi101379526

    Family and domain databases

    Gene3Di2.60.40.10, 1 hit
    InterProiView protein in InterPro
    IPR007110 Ig-like_dom
    IPR036179 Ig-like_dom_sf
    IPR013783 Ig-like_fold
    IPR003006 Ig/MHC_CS
    IPR003599 Ig_sub
    IPR013106 Ig_V-set
    PfamiView protein in Pfam
    PF07686 V-set, 1 hit
    SMARTiView protein in SMART
    SM00409 IG, 1 hit
    SUPFAMiSSF48726 SSF48726, 1 hit
    PROSITEiView protein in PROSITE
    PS50835 IG_LIKE, 1 hit
    PS00290 IG_MHC, 1 hit
    ProtoNetiSearch...

    Entry informationi

    Entry nameiA0A2U3ZK47_ODORO
    AccessioniPrimary (citable) accession number: A0A2U3ZK47
    Entry historyiIntegrated into UniProtKB/TrEMBL: July 18, 2018
    Last sequence update: July 18, 2018
    Last modified: October 10, 2018
    This is version 3 of the entry and version 1 of the sequence. See complete history.
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported
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    Main funding by: National Institutes of Health

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