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Protein
Submitted name:

calmegin

Gene

CLGN

Organism
Leptonychotes weddellii (Weddell seal)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionChaperoneUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
calmeginImported
Gene namesi
Name:CLGNImported
OrganismiLeptonychotes weddellii (Weddell seal)Imported
Taxonomic identifieri9713 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaPhocidaeLeptonychotes
Proteomesi
  • UP000245341 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei515 – 536HelicalUniRule annotationAdd BLAST22

Keywords - Cellular componenti

Endoplasmic reticulumUniRule annotation, Membrane

Interactioni

GO - Molecular functioni

Family & Domainsi

Sequence similaritiesi

Belongs to the calreticulin family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Family and domain databases

Gene3Di2.10.250.10, 1 hit
InterProiView protein in InterPro
IPR001580 Calret/calnex
IPR018124 Calret/calnex_CS
IPR009033 Calreticulin/calnexin_P_dom_sf
IPR013320 ConA-like_dom_sf
PANTHERiPTHR11073 PTHR11073, 2 hits
PfamiView protein in Pfam
PF00262 Calreticulin, 2 hits
PRINTSiPR00626 CALRETICULIN
SUPFAMiSSF49899 SSF49899, 1 hit
SSF63887 SSF63887, 1 hit
PROSITEiView protein in PROSITE
PS00803 CALRETICULIN_1, 1 hit
PS00804 CALRETICULIN_2, 1 hit
PS00805 CALRETICULIN_REPEAT, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2U3Z0Q2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRKSCPAGPG DPSTPQPAGG AGASPKGALY GGLRSSGQAS PSSAPPRRLS
60 70 80 90 100
PSVQVRAARA SGHRLRPHAH ARLAVAAERP PAGLVWGSAG TKWQRLGHLS
110 120 130 140 150
CHCRKRARRT GRWEIEELKE NRVPGDRGLV LKSRAKHHAI AAVLAKPFIF
160 170 180 190 200
ADKPLIVQYE VNFQDGIDCG GAYIKLLADT DGLNLENFYD KTSYTIMFGP
210 220 230 240 250
DKCGEDYKLH FIFRHKHPKT GVFEEKHAKP PDVDLKKFFT DRKTHLYTLV
260 270 280 290 300
LHPSNSSGFN IVSEWLLSTS QKQLRKIWNL KVLDPENGIL DIASSSVVYK
310 320 330 340 350
VMKEADESTG SGDGPVKSVR KRRKGYLELG QTPDDIDIRD ESEPAQIEDL
360 370 380 390 400
SVIKPDGWLD DEPKFIPDPN AEKPDDWNED MDGEWEAPRI SNPACRIGCG
410 420 430 440 450
EWTPPLIDNP KYKGVWRPPM IDNPNYQGIW SPRKIPNPDY FEDDHPFLLT
460 470 480 490 500
SFRALGLELW SMTSDIYFDN FIICSEKEIA DRWAADGWGV KIMVANANEP
510 520 530 540 550
GIFKQLVVAA EERPWLWLIY LLTAGLPIAL IASFCWPRKF KVELETRIFE
560 570 580
GTLLPKKCEL GLKTMGTKLM PAISALLFSQ LP
Length:582
Mass (Da):65,107
Last modified:July 18, 2018 - v1
Checksum:iE1255D8410E63816
GO

Sequence databases

RefSeqiXP_006749569.1, XM_006749506.1

Genome annotation databases

GeneIDi102729410

Cross-referencesi

Sequence databases

RefSeqiXP_006749569.1, XM_006749506.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi102729410

Family and domain databases

Gene3Di2.10.250.10, 1 hit
InterProiView protein in InterPro
IPR001580 Calret/calnex
IPR018124 Calret/calnex_CS
IPR009033 Calreticulin/calnexin_P_dom_sf
IPR013320 ConA-like_dom_sf
PANTHERiPTHR11073 PTHR11073, 2 hits
PfamiView protein in Pfam
PF00262 Calreticulin, 2 hits
PRINTSiPR00626 CALRETICULIN
SUPFAMiSSF49899 SSF49899, 1 hit
SSF63887 SSF63887, 1 hit
PROSITEiView protein in PROSITE
PS00803 CALRETICULIN_1, 1 hit
PS00804 CALRETICULIN_2, 1 hit
PS00805 CALRETICULIN_REPEAT, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2U3Z0Q2_LEPWE
AccessioniPrimary (citable) accession number: A0A2U3Z0Q2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 18, 2018
Last sequence update: July 18, 2018
Last modified: November 7, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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