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Protein
Submitted name:

hepatitis A virus cellular receptor 1 isoform X1

Gene

HAVCR1

Organism
Odobenus rosmarus divergens (Pacific walrus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Keywordsi

Molecular functionReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
hepatitis A virus cellular receptor 1 isoform X1Imported
Gene namesi
Name:HAVCR1Imported
OrganismiOdobenus rosmarus divergens (Pacific walrus)Imported
Taxonomic identifieri9708 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaOdobenidaeOdobenus
Proteomesi
  • UP000245340 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei228 – 247HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17Sequence analysisAdd BLAST17
ChainiPRO_501564495118 – 299Sequence analysisAdd BLAST282

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 123Ig-likeInterPro annotationAdd BLAST121

Keywords - Domaini

Immunoglobulin domainSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

KOiK20413

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003006 Ig/MHC_CS
IPR003599 Ig_sub
IPR013106 Ig_V-set
PfamiView protein in Pfam
PF07686 V-set, 1 hit
SMARTiView protein in SMART
SM00409 IG, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit
PS00290 IG_MHC, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A0A2U3W992-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQPWVAISSF ILLLTDAVVS YTQVIGVVGH SAMLPCTYST ANGVTTMCWG
60 70 80 90 100
RGPCPMSHCS DELVWTDGSH VTVQKHPRYK LKGNILGGNV SLTIENVAQT
110 120 130 140 150
DRGLYCCRVE HKGWFNDMKL TVSLEIMPAE VTSVPTSPRV FTSTSSTPAP
160 170 180 190 200
MQNLKSVATS SSTVQTAGTQ PTVPPQETST RQPTNLPLYS CPTDGNGTVT
210 220 230 240 250
QSSDGLWHSN QTHVLLAQNP WMTTSKGLYI GICITAAVLL SVLVVVITKK
260 270 280 290
YLCIRNKLEQ LNMVSLNDPR TGALQSAAEV GVRAEDNIYI IEDNLYVMD
Length:299
Mass (Da):32,452
Last modified:July 18, 2018 - v1
Checksum:i329BE2E7DC43577F
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2U3ZK47A0A2U3ZK47_ODORO
hepatitis A virus cellular receptor...
HAVCR1
237Annotation score:
A0A2U3W9A5A0A2U3W9A5_ODORO
hepatitis A virus cellular receptor...
HAVCR1
271Annotation score:

Sequence databases

RefSeqiXP_004404864.1, XM_004404807.1

Genome annotation databases

GeneIDi101379526
KEGGioro:101379526

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_004404864.1, XM_004404807.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi101379526
KEGGioro:101379526

Phylogenomic databases

KOiK20413

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003006 Ig/MHC_CS
IPR003599 Ig_sub
IPR013106 Ig_V-set
PfamiView protein in Pfam
PF07686 V-set, 1 hit
SMARTiView protein in SMART
SM00409 IG, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit
PS00290 IG_MHC, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2U3W992_ODORO
AccessioniPrimary (citable) accession number: A0A2U3W992
Entry historyiIntegrated into UniProtKB/TrEMBL: July 18, 2018
Last sequence update: July 18, 2018
Last modified: November 7, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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