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Protein
Submitted name:

type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

Gene

ST3GAL6

Organism
Odobenus rosmarus divergens (Pacific walrus)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferaseSAAS annotationImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
type 2 lactosamine alpha-2,3-sialyltransferase isoform X2Imported
Gene namesi
Name:ST3GAL6Imported
OrganismiOdobenus rosmarus divergens (Pacific walrus)Imported
Taxonomic identifieri9708 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaOdobenidaeOdobenus
Proteomesi
  • UP000245340 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 31HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Golgi apparatusSAAS annotation, Membrane

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi118 ↔ 271UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 29 family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

KOiK03792

Family and domain databases

Gene3Di3.90.1480.20, 1 hit
InterProiView protein in InterPro
IPR001675 Glyco_trans_29
IPR038578 GT29-like_sf
IPR012163 Sialyl_trans
PfamiView protein in Pfam
PF00777 Glyco_transf_29, 1 hit
PIRSFiPIRSF005557 Sialyl_trans, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A0A2U3VBN2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRGYLVAIFL SAVFLYYVLH CILWGTNVYW VPPVEMKRRN KIQPCLSKPA
60 70 80 90 100
FASLLRFHQF HPFLCAADFK KIASLYGSDK FDLPYGIRTS AEYFRLALSK
110 120 130 140 150
LQSCDLFDEF DNVPCKKCVV VGNGGVLKNK TLGEKIDSYD VIIRMNNGPV
160 170 180 190 200
LGHEEEVGRR TTFRLFYPES VFSDPNHNDP NTTAVLTVFK PLDLKWLWEL
210 220 230 240 250
LTGGKINTNG FWKKPALNLV YKPYQIRILD PFIIRMAAYE LLHFPKVFPK
260 270 280 290 300
NQKPKHPTTG IIAITLAFHI CHEVHLAGFK YNFSDLKSPL HYYGNATMSL
310 320 330
MNKNAYHNVT AEQLFLKDII EKNFVINLTE D
Length:331
Mass (Da):38,124
Last modified:July 18, 2018 - v1
Checksum:i0DACF4DE8E00BF0A
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2U3ZTN2A0A2U3ZTN2_ODORO
type 2 lactosamine alpha-2,3-sialyl...
ST3GAL6
370Annotation score:
A0A2U3VB68A0A2U3VB68_ODORO
type 2 lactosamine alpha-2,3-sialyl...
ST3GAL6
187Annotation score:

Sequence databases

RefSeqiXP_004391724.1, XM_004391667.1
XP_004391725.1, XM_004391668.1

Genome annotation databases

GeneIDi101383996
KEGGioro:101383996

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_004391724.1, XM_004391667.1
XP_004391725.1, XM_004391668.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi101383996
KEGGioro:101383996

Phylogenomic databases

KOiK03792

Family and domain databases

Gene3Di3.90.1480.20, 1 hit
InterProiView protein in InterPro
IPR001675 Glyco_trans_29
IPR038578 GT29-like_sf
IPR012163 Sialyl_trans
PfamiView protein in Pfam
PF00777 Glyco_transf_29, 1 hit
PIRSFiPIRSF005557 Sialyl_trans, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2U3VBN2_ODORO
AccessioniPrimary (citable) accession number: A0A2U3VBN2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 18, 2018
Last sequence update: July 18, 2018
Last modified: November 7, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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