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Entry version 15 (02 Jun 2021)
Sequence version 1 (18 Jul 2018)
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Protein
Submitted name:

Uncharacterized protein

Gene

DDP54_09085

Organism
Cellulomonas sp. WB94
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:DDP54_09085Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCellulomonas sp. WB94Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri2173174 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaActinobacteriaMicrococcalesCellulomonadaceaeCellulomonasunclassified Cellulomonas
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000245142 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini32 – 90Sigma70_r2InterPro annotationAdd BLAST59
Domaini200 – 234zf-HC2InterPro annotationAdd BLAST35

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni411 – 480DisorderedSequence analysisAdd BLAST70
Regioni1380 – 1471DisorderedSequence analysisAdd BLAST92

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi417 – 448Polar residuesSequence analysisAdd BLAST32
Compositional biasi466 – 480Polar residuesSequence analysisAdd BLAST15
Compositional biasi1380 – 1440Polar residuesSequence analysisAdd BLAST61

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the sigma-70 factor family. ECF subfamily.ARBA annotation

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR000048, IQ_motif_EF-hand-BS
IPR039425, RNA_pol_sigma-70-like
IPR014284, RNA_pol_sigma-70_dom
IPR007627, RNA_pol_sigma70_r2
IPR013325, RNA_pol_sigma_r2
IPR013324, RNA_pol_sigma_r3/r4-like
IPR036388, WH-like_DNA-bd_sf
IPR027383, Znf_put

The PANTHER Classification System

More...
PANTHERi
PTHR43133, PTHR43133, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF04542, Sigma70_r2, 1 hit
PF13490, zf-HC2, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF88659, SSF88659, 1 hit
SSF88946, SSF88946, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR02937, sigma70-ECF, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50096, IQ, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A2T9XSR9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSNAQVAGA ILSDAELITA ARSGDSSAFG QLYERHAGAA WAVARQYTNS
60 70 80 90 100
QADAEDVVAD AFTKVWTVVS GGGGPDVAFR AYLFTVIRRL GMLRVEGGRR
110 120 130 140 150
VTPTDDAATF EAAFGDQEST ENPALAGFER GLVARAFRTL PERWQAALWY
160 170 180 190 200
TEVESLTPAQ IAPLLGLTAN GVAALAYRAR EGLRQAYLQM HLQQPLDLGC
210 220 230 240 250
RDVAGKLGSY VRGGLARREI AQVDEHLESC GRCRALVLEL GDVSHGMRGV
260 270 280 290 300
IAPLVLGVLG LGALTHPLPV GGGIAAGLAA LGHGSSAGGG AGAGAGAGAG
310 320 330 340 350
AGAGAQGVGS GAAAGGGAGA SGAASTGAVA TVGPGATVGA GASAGAGAAA
360 370 380 390 400
GTGALAAVGS TAATGGLAAF LGSLPIGIVA AAAAVVVAGA AGVAGLLGVF
410 420 430 440 450
SAGVPDAAPP PEAVAMSTQS PEPTGTASDL APTTTPTDGP TDSPTVNPTD
460 470 480 490 500
AAVLAPAGIP TDAATPLPTS IPSGTTGTGT GSVVVPQPTS DATAPAVVDP
510 520 530 540 550
VVPAPVVPDP VATSTPAPTT DPVVPGAPAF QLVTAPLALS AQAAAQSVSL
560 570 580 590 600
TVTNSGTANA IDLTADVTLP AGAVVTGATT TTLMSFVLAG RFEAAAPATD
610 620 630 640 650
WTCTPEADPQ HATCRLALLA SGATSRLTLT VMVGEDLDLS PDDSSAISVV
660 670 680 690 700
IRGPGIEPRT LTAPVTMKPS VARLRLDATT VDPLVAANVP GAAPVSRGNL
710 720 730 740 750
HLALSNAGQL AAATPTVTLQ LPSRVHVAGV SGSWTCTPVW PGGFDASAGT
760 770 780 790 800
DGEVVTCTRP QLAGRGADGL DIELYALAGA VQTGSPAVLV SLSPDAPQVS
810 820 830 840 850
QGVRVALDIR TPADLRVTVP TSSAAIDLVA GTPARVPVTV TNVGQTHASN
860 870 880 890 900
ARVLLTLPAG ARWTAPAVAA PDWACVGAGT SRDVLPTDAT IECTTPTIAR
910 920 930 940 950
GAAVVLTAGL TSDGSVRGPL SVFRARVVPL GGPDGSTVDV VVTVHAAALE
960 970 980 990 1000
LSAPTALVTD GTFAVGDLAS LTFTVLNNGN LAATSSSATV TLPAQVVAAL
1010 1020 1030 1040 1050
DPGSTPGCAA AKDGPTVTCD LGPLTPAQSV KVQLGVRAVS AGSGDVAVAL
1060 1070 1080 1090 1100
SGGNGPAAKD SEGVVVAPGG LMPRFSTAGL TGTWNVTEIG APLLTCTPSV
1110 1120 1130 1140 1150
KCTAALTGKG PTLNNNDLPM VALLENGIAD AKVASTSQLQ LPAGREIAFA
1160 1170 1180 1190 1200
GLYWAASGGA PTTQPVSARL AGPKQVLTAV TGALLAHSGG TAGTHEYQAF
1210 1220 1230 1240 1250
ADVTAQVRQG GGGSWTFADP SNGVGSGEGA YAGWALVVVY ADSSAGAGTV
1260 1270 1280 1290 1300
VVHDGAMTVN MGSSASLVVA TDPGQSARIG AVVWEGDRGG SGDTLTLDGT
1310 1320 1330 1340 1350
ALVPVRWNGS GKDPGDATNA FDSTAVGSDY ANSLGVDAKG FLETRIAAQA
1360 1370 1380 1390 1400
VAGTSVLTAD APNEGFVVGV VTVRTAERAT QVSRSITAAT AASTGTSPEV
1410 1420 1430 1440 1450
SSSTSPAVSG SWSSETMTSA TSSRDTVPAG TASSSRTRPE PAASVRAPGR
1460 1470
TMVQSRSLPA RSASLALLAR R
Length:1,471
Mass (Da):144,104
Last modified:July 18, 2018 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i48735F65B056B2DC
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
QEES01000002 Genomic DNA Translation: PVU83131.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
PVU83131; PVU83131; DDP54_09085

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
QEES01000002 Genomic DNA Translation: PVU83131.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiPVU83131; PVU83131; DDP54_09085

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR000048, IQ_motif_EF-hand-BS
IPR039425, RNA_pol_sigma-70-like
IPR014284, RNA_pol_sigma-70_dom
IPR007627, RNA_pol_sigma70_r2
IPR013325, RNA_pol_sigma_r2
IPR013324, RNA_pol_sigma_r3/r4-like
IPR036388, WH-like_DNA-bd_sf
IPR027383, Znf_put
PANTHERiPTHR43133, PTHR43133, 1 hit
PfamiView protein in Pfam
PF04542, Sigma70_r2, 1 hit
PF13490, zf-HC2, 1 hit
SUPFAMiSSF88659, SSF88659, 1 hit
SSF88946, SSF88946, 1 hit
TIGRFAMsiTIGR02937, sigma70-ECF, 1 hit
PROSITEiView protein in PROSITE
PS50096, IQ, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A2T9XSR9_9CELL
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A2T9XSR9
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 18, 2018
Last sequence update: July 18, 2018
Last modified: June 2, 2021
This is version 15 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteomeImported
UniProt is an ELIXIR core data resource
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