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Entry version 8 (11 Dec 2019)
Sequence version 1 (20 Jun 2018)
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Protein
Submitted name:

HYDIN axonemal central pair apparatus protein

Gene

HYDIN

Organism
Pan paniscus (Pygmy chimpanzee) (Bonobo)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
HYDIN axonemal central pair apparatus proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:HYDINImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPan paniscus (Pygmy chimpanzee) (Bonobo)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9597 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000240080 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 16

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini541 – 640ASHInterPro annotationAdd BLAST100

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00610000086095

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.40.10, 6 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR031549 ASH
IPR033305 Hydin-like
IPR013783 Ig-like_fold

The PANTHER Classification System

More...
PANTHERi
PTHR23053 PTHR23053, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF15780 ASH, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A2R9BU59-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
RKSAGGFKLG MEPLSGGGVC EKKKLLKMTS RRLEESMGAV QMGLVNMFKG
60 70 80 90 100
FQSKVLPPLS PKVVTEEEVN RMLTPSEFLK EMSLTTEQRL AKTRLMCRPQ
110 120 130 140 150
IIELLDMGET THQKFSGIDL DQALFQPFPS EIIFQNYTPC EVYEVPLILR
160 170 180 190 200
NNDKIPRLVK VVEESSPYFK VISPKDTGHK VAPGVPSVFR ILFTPEENKD
210 220 230 240 250
YAHTLTCVTE REKFIVPIKA RGARAILDFP DKLNFSTCPV KYSTQKILLV
260 270 280 290 300
RNIGNKNAVF HIKTCRPFSI EPAVGTLNVG ESMQLEVEFE PQSVGDHSGR
310 320 330 340 350
LIVCYDTGEK VFVSLYGAAI DMNIRLDKNS LTIEKTYISL ANQRTITIHN
360 370 380 390 400
RSNIIAHFLW KVFATQQEED REKYRVCDDL IKEEKDETDE FFEECITDPL
410 420 430 440 450
LREHLSVLSR TFANQRRLVQ GDSKLFFNNV FTVEPLEGDV WPNSSAEITV
460 470 480 490 500
YFNPLEAKLY QQTIYCDILG REIRLPLRIK GEGMGPKIHF NFELLDIGKV
510 520 530 540 550
FTGSAHCYEA ILYNKGSIDA LFNMTPPTSA LGACFVFSPK EGIIEPSGVQ
560 570 580 590 600
AIQISFSSTI LGNFEEEFLV NVNGSPEPVK LTIRGCVIGP TFHFNVPALH
610 620 630 640 650
FGDVSFGFPH TLICSLNNTS LIPMTYKLRI PGDGLGHKSI SYCEQHVDYK
660 670 680 690 700
RPSWTKEEIS SMKPKEFTIT PDCGTIRPQG FAAIRVTLCS NTVQKYELAL
710 720 730 740 750
VVDVEGIGEE VLALLITARC VVPALHLVNT EVDFGHCFLK YPYEKTLQLA
760 770 780 790 800
NQDDLPGFYE VQPQVCEEVP TVLFSSPTPS GVISPSSTIH IPLVLETQVT
810 820 830 840 850
GEHRSTVYIS VFGSQDPPLV CHLKSAGEGP VIYVHPNQVD FGNIYVLKDS
860 870 880 890 900
SRILNLCNQS FIPAFFQAHM AHKKSLWTIE PNEGMVPPET DVQLALTANL
910 920 930 940 950
NDTLTFKDCV ILDIENSSTY RIPVQASGTG STIVSDKPFA PELNLGAHFR
Length:950
Mass (Da):106,281
Last modified:June 20, 2018 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i2D66EF9A1061A858
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2R9BNT1A0A2R9BNT1_PANPA
HYDIN axonemal central pair apparat...
HYDIN
4,742Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AJFE02103669 Genomic DNA No translation available.
AJFE02103670 Genomic DNA No translation available.
AJFE02103671 Genomic DNA No translation available.
AJFE02103672 Genomic DNA No translation available.
AJFE02103673 Genomic DNA No translation available.
AJFE02103674 Genomic DNA No translation available.
AJFE02103675 Genomic DNA No translation available.
AJFE02103676 Genomic DNA No translation available.
AJFE02103677 Genomic DNA No translation available.
AJFE02103678 Genomic DNA No translation available.

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSPPAT00000052974; ENSPPAP00000030116; ENSPPAG00000038001

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJFE02103669 Genomic DNA No translation available.
AJFE02103670 Genomic DNA No translation available.
AJFE02103671 Genomic DNA No translation available.
AJFE02103672 Genomic DNA No translation available.
AJFE02103673 Genomic DNA No translation available.
AJFE02103674 Genomic DNA No translation available.
AJFE02103675 Genomic DNA No translation available.
AJFE02103676 Genomic DNA No translation available.
AJFE02103677 Genomic DNA No translation available.
AJFE02103678 Genomic DNA No translation available.

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsembliENSPPAT00000052974; ENSPPAP00000030116; ENSPPAG00000038001

Phylogenomic databases

GeneTreeiENSGT00610000086095

Family and domain databases

Gene3Di2.60.40.10, 6 hits
InterProiView protein in InterPro
IPR031549 ASH
IPR033305 Hydin-like
IPR013783 Ig-like_fold
PANTHERiPTHR23053 PTHR23053, 1 hit
PfamiView protein in Pfam
PF15780 ASH, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A2R9BU59_PANPA
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A2R9BU59
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: June 20, 2018
Last sequence update: June 20, 2018
Last modified: December 11, 2019
This is version 8 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteomeImported
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