UniProtKB - A0A2R9A4V8 (A0A2R9A4V8_PANPA)
Protein
Submitted name:
Uncharacterized protein
Gene
TNRC6A
Organism
Pan paniscus (Pygmy chimpanzee) (Bonobo)
Status
Functioni
GO - Molecular functioni
- nucleic acid binding Source: InterPro
GO - Biological processi
- cellular response to starvation Source: Ensembl
- miRNA mediated inhibition of translation Source: Ensembl
Keywordsi
Biological process | RNA-mediated gene silencingARBA annotation |
Names & Taxonomyi
Protein namesi | Submitted name: Uncharacterized proteinImported |
Gene namesi | Name:TNRC6AImported |
Organismi | Pan paniscus (Pygmy chimpanzee) (Bonobo)Imported |
Taxonomic identifieri | 9597 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Pan |
Proteomesi |
|
Subcellular locationi
Golgi apparatus
- Golgi apparatus Source: Ensembl
Nucleus
- nucleoplasm Source: Ensembl
Other locations
- P-body Source: Ensembl
- RISC complex Source: Ensembl
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 1078 – 1204 | Ago_hookInterPro annotationAdd BLAST | 127 | |
Domaini | 1283 – 1484 | M_domainInterPro annotationAdd BLAST | 202 | |
Domaini | 1508 – 1781 | TNRC6-PABC_bdgInterPro annotationAdd BLAST | 274 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 155 | DisorderedSequence analysisAdd BLAST | 155 | |
Regioni | 175 – 296 | DisorderedSequence analysisAdd BLAST | 122 | |
Regioni | 438 – 457 | DisorderedSequence analysisAdd BLAST | 20 | |
Regioni | 497 – 519 | DisorderedSequence analysisAdd BLAST | 23 | |
Regioni | 563 – 702 | DisorderedSequence analysisAdd BLAST | 140 | |
Regioni | 721 – 1144 | DisorderedSequence analysisAdd BLAST | 424 | |
Regioni | 1157 – 1199 | DisorderedSequence analysisAdd BLAST | 43 | |
Regioni | 1252 – 1275 | DisorderedSequence analysisAdd BLAST | 24 | |
Regioni | 1326 – 1373 | DisorderedSequence analysisAdd BLAST | 48 | |
Regioni | 1427 – 1459 | DisorderedSequence analysisAdd BLAST | 33 | |
Regioni | 1580 – 1638 | DisorderedSequence analysisAdd BLAST | 59 | |
Regioni | 1727 – 1752 | DisorderedSequence analysisAdd BLAST | 26 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 1 – 52 | PolyampholyteSequence analysisAdd BLAST | 52 | |
Compositional biasi | 56 – 131 | PolarSequence analysisAdd BLAST | 76 | |
Compositional biasi | 175 – 233 | PolarSequence analysisAdd BLAST | 59 | |
Compositional biasi | 258 – 296 | PolarSequence analysisAdd BLAST | 39 | |
Compositional biasi | 563 – 679 | PolarSequence analysisAdd BLAST | 117 | |
Compositional biasi | 680 – 702 | PolyampholyteSequence analysisAdd BLAST | 23 | |
Compositional biasi | 721 – 740 | PolarSequence analysisAdd BLAST | 20 | |
Compositional biasi | 752 – 785 | PolarSequence analysisAdd BLAST | 34 | |
Compositional biasi | 804 – 821 | PolarSequence analysisAdd BLAST | 18 | |
Compositional biasi | 835 – 953 | PolarSequence analysisAdd BLAST | 119 | |
Compositional biasi | 985 – 1007 | PolyampholyteSequence analysisAdd BLAST | 23 | |
Compositional biasi | 1014 – 1060 | PolarSequence analysisAdd BLAST | 47 | |
Compositional biasi | 1097 – 1122 | PolarSequence analysisAdd BLAST | 26 | |
Compositional biasi | 1157 – 1175 | PolarSequence analysisAdd BLAST | 19 | |
Compositional biasi | 1326 – 1368 | PolarSequence analysisAdd BLAST | 43 | |
Compositional biasi | 1729 – 1743 | Pro-richSequence analysisAdd BLAST | 15 |
Sequence similaritiesi
Belongs to the GW182 family.ARBA annotation
Phylogenomic databases
GeneTreei | ENSGT00940000158180 |
Family and domain databases
CDDi | cd12711, RRM_TNRC6A, 1 hit |
Gene3Di | 3.30.70.330, 1 hit |
InterProi | View protein in InterPro IPR019486, Argonaute_hook_dom IPR026805, GW182_M_dom IPR012677, Nucleotide-bd_a/b_plait_sf IPR035979, RBD_domain_sf IPR032226, TNRC6_PABC-bd IPR033501, TNRC6A IPR034924, TNRC6A_RRM |
PANTHERi | PTHR13020:SF28, PTHR13020:SF28, 1 hit |
Pfami | View protein in Pfam PF10427, Ago_hook, 1 hit PF12938, M_domain, 1 hit PF16608, TNRC6-PABC_bdg, 1 hit |
SUPFAMi | SSF54928, SSF54928, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All
A0A2R9A4V8-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
ELEAKATKDV ERNLSRDLVQ EEEQLMEEKK KKKDDKKKKE AAQKKATEQK
60 70 80 90 100
IKVPEQIKPS VSQPQPANSN NGTSTATSTN NNAKRATANN QQPQQQQQQQ
110 120 130 140 150
QQQQQQPQQQ PQPQPQQQQQ QQQQPQQQPQ ALPRYPREVP PRFRHQEHKQ
160 170 180 190 200
LLKRGQHFPV IAANLGSAVK VLNSQSESSA LTNQQPQNNG EVQNSKNQSD
210 220 230 240 250
INHSTSGSHY ENSQRGPVSS TSDSSTNCKN AVVSDLSEKE AWPSAPGSDP
260 270 280 290 300
ELASECMDAD SASSSESERN ITIMASGNTG GEKDGLRNST GLGSQNKFVV
310 320 330 340 350
GSSSNNVGHG SSTGPWGFSH GAIISTCQVS VDAPESKSES SNNRMNAWGT
360 370 380 390 400
VSSSSNGGLN PSTLNSASNH GAWPVLENNG LALKGPVGSG SSGINIQCST
410 420 430 440 450
IGQMPNNQSI NSKVSGGSTH GTWGSLQETC ESEVSGTQKV SFSGQPQNIT
460 470 480 490 500
TEMTGPNNTT NFMTSSLPNS GSVQNNELPS SNTGAWRVST MNHPQMQAPS
510 520 530 540 550
GMNGTSLSHL SNGESKSGGS YGTTWGAYGS NYSGDKCSGP NGQANGDTVN
560 570 580 590 600
ATLMQPGVNG PMGTNFQVNT NKGGGVWESG AANSQSTSWG SGNGANSGGS
610 620 630 640 650
RRGWGTPAQN TGTNLPSVEW NKLPSNQHSN DSANGNGKTF TNGWKSTEEE
660 670 680 690 700
DQGSATSQTN EQSSVWAKTG GTVESDGSTE STGRLEEKGT GESQSRDRRK
710 720 730 740 750
IDQHTLLQSI VNRTDLDPRV LSNSGWGQTP IKQNTAWDTE TSPRGERKTD
760 770 780 790 800
NGTEAWGSSA TQTFNSGACI DKTSPNGNDT SSVSGWGDPK PALRWGDSKG
810 820 830 840 850
SNCQGGWEDD SAATGMVKSN QWGNCKEEKA AWNDSQKNKQ GWGDGQKSSQ
860 870 880 890 900
GWSVSASDNW GETSRSNHWG EANKKSSSGG SDSDRSVSGW NELGKTSSFT
910 920 930 940 950
WGNNINPNNS SGWDESSKPT PSQGWGDPPK SNQSLGWGDS SKPVSSPDWN
960 970 980 990 1000
KQQDIVGSWG IPPATGKPPG TGWLGGPIPA PAKEEEPTGW EEPSPESIRR
1010 1020 1030 1040 1050
KMEIDDGTSA WGDPSKYNYK NVNMWNKNVP NGNSRSDQQA QVHQLLTPAS
1060 1070 1080 1090 1100
AISNKEASSG SGWGEPWGEP STPATTVDNG TSAWGKPIDS GPSWGEPIAA
1110 1120 1130 1140 1150
ASSTSTWGSS SVGPQALSKS GPKSMQDGWC GDDMPLPGNR PTGWEEEEDV
1160 1170 1180 1190 1200
EIGMWNSNSS QELNSSLNWP PYSKKMSSKG LSGKKRRRER GMMKGGNKQE
1210 1220 1230 1240 1250
EAWINPFVKQ FSNISFSRDS PEENVQSNKM DLSGGMLQDK RMEIDKHSLN
1260 1270 1280 1290 1300
IGDYNRTVGK GPGSRPQISK ESSMERNPYF DKDGIVADES QNMQFMSSQS
1310 1320 1330 1340 1350
MKLPPSNSAL PNQALGSIAG LGMQNLNSVR QNGNPSMFGV GNTAAQPRGM
1360 1370 1380 1390 1400
QQPPAQPLSS SQPNLRAQVP PPLLSPQVPV SLLKYAPNNG GLNPLFGPQQ
1410 1420 1430 1440 1450
VAMLNQLSQL NQLSQISQLQ RLLAQQQRAQ SQRSVPSGNR PQQDQQGRPL
1460 1470 1480 1490 1500
SVQQQMMQQS RQLDPNLLVK QQTPPSQQQP LHQPAMKSFL DNVMPHTTPE
1510 1520 1530 1540 1550
LQKGPSPINA FSNFPIGLNS NLNVNMDMNS IKEPQSRLRK WTTVDSISVN
1560 1570 1580 1590 1600
TSLDQNSSKH GAISSGFRLE ESPFVPYDFM NSSTSPASPP GSIGDGWPRA
1610 1620 1630 1640 1650
KSPNGSSSVN WPPEFRPGEP WKGYPNIDPE TDPYVTPGSV INNLSINTVR
1660 1670 1680 1690 1700
EVDHLRDRNS GSSSSLNTTL PSTSAWSSIR ASNYNVPLSS TAQSTSARNS
1710 1720 1730 1740 1750
DSKLTWSPGS VTNTSLAHEL WKVPLPPKNI TAPSRPPPGL TGQKPPLSTW
1760 1770 1780 1790 1800
DNSPLRIGGG WGNSDARYTP GSSWGESSSG RITNWLVLKN LTPQIDGSTL
1810 1820 1830 1840 1850
RTLCMQHGPL ITFHLNLPHG NALVRYSSKE EVVKAQKSLH MCVLGNTTIL
1860 1870 1880 1890 1900
AEFASEEEIS RFFAQSQSLT PSPSWQSLGS SQSRLGSLDC SHSFSSRTDL
1910 1920 1930 1940 1950
NHWNGAGLSG TNCGDLHGTS LWGTPHYSTS LWGPPSSSDP RGISSPSPIN
1960
AFLSVDHLGG GGESM
Computationally mapped potential isoform sequencesi
There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA0A2R9A4V3 | A0A2R9A4V3_PANPA | Uncharacterized protein | TNRC6A | 1,916 | Annotation score: | ||
A0A2R8ZZB5 | A0A2R8ZZB5_PANPA | Uncharacterized protein | TNRC6A | 1,936 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AJFE02043590 Genomic DNA No translation available. AJFE02043591 Genomic DNA No translation available. AJFE02043592 Genomic DNA No translation available. AJFE02043593 Genomic DNA No translation available. AJFE02043594 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENSPPAT00000032970; ENSPPAP00000010320; ENSPPAG00000028379 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AJFE02043590 Genomic DNA No translation available. AJFE02043591 Genomic DNA No translation available. AJFE02043592 Genomic DNA No translation available. AJFE02043593 Genomic DNA No translation available. AJFE02043594 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
Ensembli | ENSPPAT00000032970; ENSPPAP00000010320; ENSPPAG00000028379 |
Phylogenomic databases
GeneTreei | ENSGT00940000158180 |
Family and domain databases
CDDi | cd12711, RRM_TNRC6A, 1 hit |
Gene3Di | 3.30.70.330, 1 hit |
InterProi | View protein in InterPro IPR019486, Argonaute_hook_dom IPR026805, GW182_M_dom IPR012677, Nucleotide-bd_a/b_plait_sf IPR035979, RBD_domain_sf IPR032226, TNRC6_PABC-bd IPR033501, TNRC6A IPR034924, TNRC6A_RRM |
PANTHERi | PTHR13020:SF28, PTHR13020:SF28, 1 hit |
Pfami | View protein in Pfam PF10427, Ago_hook, 1 hit PF12938, M_domain, 1 hit PF16608, TNRC6-PABC_bdg, 1 hit |
SUPFAMi | SSF54928, SSF54928, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A2R9A4V8_PANPA | |
Accessioni | A0A2R9A4V8Primary (citable) accession number: A0A2R9A4V8 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | June 20, 2018 |
Last sequence update: | June 20, 2018 | |
Last modified: | August 12, 2020 | |
This is version 12 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |