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Protein
Submitted name:

Uncharacterized protein

Gene

ABCC5

Organism
Callithrix jacchus (White-tufted-ear marmoset)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:ABCC5Imported
OrganismiCallithrix jacchus (White-tufted-ear marmoset)Imported
Taxonomic identifieri9483 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeCallithrixCallithrix
Proteomesi
  • UP000008225 Componenti: Unplaced

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei179 – 199HelicalSequence analysisAdd BLAST21
Transmembranei219 – 242HelicalSequence analysisAdd BLAST24
Transmembranei291 – 313HelicalSequence analysisAdd BLAST23
Transmembranei319 – 336HelicalSequence analysisAdd BLAST18
Transmembranei395 – 416HelicalSequence analysisAdd BLAST22
Transmembranei428 – 447HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini180 – 459ABC transmembrane type-1InterPro annotationAdd BLAST280

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00880000137856

Family and domain databases

Gene3Di1.20.1560.10, 1 hit
InterProiView protein in InterPro
IPR011527 ABC1_TM_dom
IPR036640 ABC1_TM_sf
IPR030238 ABCC5
PANTHERiPTHR24223:SF196 PTHR24223:SF196, 1 hit
PfamiView protein in Pfam
PF00664 ABC_membrane, 1 hit
SUPFAMiSSF90123 SSF90123, 1 hit
PROSITEiView protein in PROSITE
PS50929 ABC_TM1F, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All

A0A2R8MTU1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKDIDIGKEY IIPSPGYASV RERSSTSGPH RDREDSKFRR TRPLECQDAL
60 70 80 90 100
ETAARAEGLS LDVSMHSQLR ILDEEHPKGK YHHGLSALKP IRTTSKHQHP
110 120 130 140 150
VDNAGLFSCM TFSWLSSLAH VAHKKGELSM EDVWSLSKHE SSDVNCRRLE
160 170 180 190 200
RLWQEELNEV GPDAASLRRV VWIFCRTRLI LSIVCLMITQ LAGFSGPAFM
210 220 230 240 250
VKHLLEYTQA TESNLQYSLL LVLGLLLTEI VRSWSLALTW ALNYRTGVRL
260 270 280 290 300
RGAILTMAFK KILKLKNIKE KSLGELINIC SNDGQRMFEA AAVGSLLAGG
310 320 330 340 350
PVVAILGMIY NVIILGPTGF LGSAVFILFY PAMMFASRLT AYFRRKCVAA
360 370 380 390 400
TDERVQKMNE VLTYIKFIKM YAWVKAFSQS VQKIREEERR ILEKAGYFQS
410 420 430 440 450
ITVGVAPIVV VIASVVTFSV HMTLGFDLTA AQAFTVVTVF NSMTFALKVT
460 470 480
PFSVKSLSEA SVAVDRFKVS LVAHACNPST LGDQDRRS
Length:488
Mass (Da):54,522
Last modified:June 20, 2018 - v1
Checksum:iCA3A3E3172DC753B
GO

Computationally mapped potential isoform sequencesi

There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F7H8G0F7H8G0_CALJA
Uncharacterized protein
ABCC5
1,394Annotation score:
A0A2R8MP42A0A2R8MP42_CALJA
Uncharacterized protein
ABCC5
1,177Annotation score:
A0A2R8MPX3A0A2R8MPX3_CALJA
Uncharacterized protein
ABCC5
1,437Annotation score:
F7IFQ6F7IFQ6_CALJA
Uncharacterized protein
ABCC5
224Annotation score:
F6Z398F6Z398_CALJA
Uncharacterized protein
ABCC5
208Annotation score:
A0A2R8PG18A0A2R8PG18_CALJA
Uncharacterized protein
ABCC5
230Annotation score:
A0A2R8P9Q8A0A2R8P9Q8_CALJA
Uncharacterized protein
ABCC5
53Annotation score:

Genome annotation databases

EnsembliENSCJAT00000074881; ENSCJAP00000064957; ENSCJAG00000013172

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSCJAT00000074881; ENSCJAP00000064957; ENSCJAG00000013172

Phylogenomic databases

GeneTreeiENSGT00880000137856

Family and domain databases

Gene3Di1.20.1560.10, 1 hit
InterProiView protein in InterPro
IPR011527 ABC1_TM_dom
IPR036640 ABC1_TM_sf
IPR030238 ABCC5
PANTHERiPTHR24223:SF196 PTHR24223:SF196, 1 hit
PfamiView protein in Pfam
PF00664 ABC_membrane, 1 hit
SUPFAMiSSF90123 SSF90123, 1 hit
PROSITEiView protein in PROSITE
PS50929 ABC_TM1F, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2R8MTU1_CALJA
AccessioniPrimary (citable) accession number: A0A2R8MTU1
Entry historyiIntegrated into UniProtKB/TrEMBL: June 20, 2018
Last sequence update: June 20, 2018
Last modified: October 10, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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