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Protein
Submitted name:

Leucine rich repeats and immunoglobulin like domains 1

Gene

LRIG1

Organism
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Leucine rich repeats and immunoglobulin like domains 1Imported
Gene namesi
Name:LRIG1Imported
OrganismiSaimiri boliviensis boliviensis (Bolivian squirrel monkey)Imported
Taxonomic identifieri39432 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeSaimiriinaeSaimiri
Proteomesi
  • UP000233220 Componenti: Whole Genome Shotgun Assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei794 – 817HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 34Sequence analysisAdd BLAST34
ChainiPRO_501432388135 – 1091Sequence analysisAdd BLAST1057

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini496 – 595Ig-likeInterPro annotationAdd BLAST100
Domaini600 – 689Ig-likeInterPro annotationAdd BLAST90
Domaini694 – 780Ig-likeInterPro annotationAdd BLAST87

Keywords - Domaini

Leucine-rich repeatSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00920000148954

Family and domain databases

Gene3Di2.60.40.10, 3 hits
3.80.10.10, 2 hits
InterProiView protein in InterPro
IPR000483 Cys-rich_flank_reg_C
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR001611 Leu-rich_rpt
IPR003591 Leu-rich_rpt_typical-subtyp
IPR032675 LRR_dom_sf
IPR000372 LRRNT
PfamiView protein in Pfam
PF07679 I-set, 2 hits
PF13855 LRR_8, 4 hits
PF01463 LRRCT, 1 hit
SMARTiView protein in SMART
SM00409 IG, 3 hits
SM00408 IGc2, 3 hits
SM00369 LRR_TYP, 14 hits
SM00082 LRRCT, 1 hit
SM00013 LRRNT, 1 hit
SUPFAMiSSF48726 SSF48726, 3 hits
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 3 hits
PS51450 LRR, 14 hits

Sequencei

Sequence statusi: Complete.

A0A2K6UGT9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARPVCGAVG TPRRSPCLLL PWLLLLLQLE PVTAAAGPRA PCAAACTCTG
60 70 80 90 100
DSLDCGGRGL AALPGDLPSW TRSLNLSYNR LSEIDPAGFE DLLNLQEVYL
110 120 130 140 150
NNNELTAVPS LGAASSHVVS LFLQHNKIRS VEGSMLKAYV SLEVLDMSSN
160 170 180 190 200
NITEVRNTCF PHGPPIKELN LAGNRIGTLE LGAFDGLSRS LLTLRLSKNR
210 220 230 240 250
ITQLPVRAFK LPRLTQLDLN RNRIRLIEGL TFQGLNSLEV LKLQRNNISK
260 270 280 290 300
LTDGAFWGLS KMHVLHLEYN SLVEVNSGSL YGLTALQQLH LSNNSIARIH
310 320 330 340 350
RKGWSFCQKL HELVLSFNNL TRLDEESLAE LSSLSVLRLS HNSISHIAEG
360 370 380 390 400
AFKGLKSLRV LDLDHNEISG TIEDTSGAFS GLDSLSKLSL FGNKIKSVAK
410 420 430 440 450
RAFSGLEGLE HLNLGGNAIR SVQFDAFVKM KNLKELHMSS DSFLCDCQLK
460 470 480 490 500
WLPPWLIGRM LQAFVTATCA HPESLKGQSI FSVPPESFVC DDFLKPQIIT
510 520 530 540 550
QPETTMAMVG KDIRFTCSAA SSSSSPMTFA WKKDNEVLTN ADMENFVHVH
560 570 580 590 600
AQDGEVMEYT TILHLRQVTF GHEGRYQCVI TNHFGSTYSH KARLTVNVLP
610 620 630 640 650
SFTKTPHDIT IRTTTMARLE CAATGHPNPQ IAWQKDGGTD FPAARERRMH
660 670 680 690 700
VMPDDDVFFI TDVKIDDAGV YSCTAQNSAG SISANATLTV LETPSLAVPL
710 720 730 740 750
EDRVVSVGET VALQCKATGN PPPRITWFKG DHPLSLTERH HLTPDNQLLV
760 770 780 790 800
VQNVVAEDAG QYTCEMSNTL GTERAHSQLS ILPAAGCRKD GTTVGIFTIA
810 820 830 840 850
VVSSIVLTSL VWVCIIYQTR KKSEEYSVTN TDETIVPPDV PSYLSSQGTL
860 870 880 890 900
SDRQETVVRT EGGHQANGHI ESNGVCPRDP SHFAEADAHS VACRQPKLCV
910 920 930 940 950
GYHKEPWKAT EKADGTPGPH QMEHGGWVVC SDCNTEVDCH SREQAFHPQP
960 970 980 990 1000
VSRDSVQPGA PHGSEAGGSD REHSPHHQCS GTAAGSCPEC QGSLYPSNHD
1010 1020 1030 1040 1050
RMLTAVKKKP VASLDGKGDS SWTLARLYDP DSELQPASSL SSSNPEHTEA
1060 1070 1080 1090
QHLLVSNGHL PKACDSSPES TPLTGQLPGK QRVPLLLAPK S
Length:1,091
Mass (Da):118,823
Last modified:March 28, 2018 - v1
Checksum:iA76D8D033320E97A
GO

Sequence databases

RefSeqiXP_003940253.1, XM_003940204.2

Genome annotation databases

EnsembliENSSBOT00000048021; ENSSBOP00000031133; ENSSBOG00000031804
GeneIDi101031214
KEGGisbq:101031214

Similar proteinsi

Entry informationi

Entry nameiA0A2K6UGT9_SAIBB
AccessioniPrimary (citable) accession number: A0A2K6UGT9
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: July 18, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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