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Protein

Transcription initiation factor TFIID subunit

Gene
N/A
Organism
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription initiation factor TFIID subunitUniRule annotation
OrganismiSaimiri boliviensis boliviensis (Bolivian squirrel monkey)Imported
Taxonomic identifieri39432 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeSaimiriinaeSaimiri
Proteomesi
  • UP000233220 Componenti: Whole Genome Shotgun Assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi1385 ↔ 1640UniRule annotation

Keywords - PTMi

Disulfide bondUniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1418 – 1488BromoInterPro annotationAdd BLAST71
Domaini1541 – 1611BromoInterPro annotationAdd BLAST71

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1076 – 1096Sequence analysisAdd BLAST21
Coiled coili1140 – 1160Sequence analysisAdd BLAST21
Coiled coili1234 – 1265Sequence analysisAdd BLAST32
Coiled coili1495 – 1522Sequence analysisAdd BLAST28

Sequence similaritiesi

Belongs to the TAF1 family.UniRule annotation

Keywords - Domaini

BromodomainPROSITE-ProRule annotationSAAS annotation, Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00910000144099

Family and domain databases

Gene3Di1.10.1100.10, 1 hit
1.20.920.10, 2 hits
InterProiView protein in InterPro
IPR001487 Bromodomain
IPR036427 Bromodomain-like_sf
IPR018359 Bromodomain_CS
IPR011177 TAF1_animal
IPR009067 TAF_II_230-bd
IPR036741 TAFII-230_TBP-bd_sf
IPR022591 TFIID_sub1_DUF3591
PfamiView protein in Pfam
PF00439 Bromodomain, 2 hits
PF12157 DUF3591, 1 hit
PF09247 TBP-binding, 1 hit
PIRSFiPIRSF003047 TAF1_animal, 1 hit
PRINTSiPR00503 BROMODOMAIN
SMARTiView protein in SMART
SM00297 BROMO, 2 hits
SUPFAMiSSF47055 SSF47055, 1 hit
SSF47370 SSF47370, 2 hits
PROSITEiView protein in PROSITE
PS00633 BROMODOMAIN_1, 1 hit
PS50014 BROMODOMAIN_2, 2 hits

Sequencei

Sequence statusi: Complete.

A0A2K6TX42-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGPGCDLLLR AAAAISATAI MSDTDSDEDS AGGGPFSLAG FLFGNINGAG
60 70 80 90 100
QLEGESVLDD ECKKHLAGLG ALGLGSLITE LTANEELAGT DGALVNDEGW
110 120 130 140 150
IRSTEDAVDY SDINEVAEDE SRRYQQTMGS LQPLCHSGDS LVRDRVSPCF
160 170 180 190 200
QTGLKLLTPD DPPPWPPKCW DYRYEPPLSE NGEGIILPSI IAPSSLASEK
210 220 230 240 250
VDFSSSSDSE SEMGSQEATQ AESEDGKLTL PLAGIMQHDA TKLLPSVTEL
260 270 280 290 300
FPEFRPGKVL RFLRLFGPGK NVPSVWRSAR RKRKKKHREL IQEEQIQEVE
310 320 330 340 350
CSVESEVSQK SLWNYDYAPP PPPEQCLSDD EITMMAPVES KFSQSTGDID
360 370 380 390 400
KVTDTKPRVA EWRYGPARLW YDMLGVPEDG SGFDYGFKLK KTEHEPVIKS
410 420 430 440 450
RMVEEFRKLE ESNGTDLLAD ENFLMVTQLH WEDDIIWDGE DVKHKGTKPQ
460 470 480 490 500
RASLAGWLPS SMTRNAMAYN VQQGFAATLD DDKPWYSIFP IDNEDLVYGR
510 520 530 540 550
WEDNIIWDAQ AMPRLLEPPV LTLDPNDENL ILEIPDEKEE ATSNSPSKES
560 570 580 590 600
KKESSLKKSR ILLGKTGVIK EEPQQNMSQP EVKDPWNLSN DEYYYPKQQG
610 620 630 640 650
LRGTFGGNII QHSIPAVELR QPFFPTHMGP IKLRQFHRPP LKKYSFGALS
660 670 680 690 700
QPGPHSVQPL LKHIKKKAKM REQERQASGG GEMFFMRTPQ DLTGKDGDLI
710 720 730 740 750
LAEYSEENGP LMMQVGMATK IKNYYKRKPG KDPGAPDCKY GETVYCHTSP
760 770 780 790 800
FLGSLHPGQL LQAFENNLFR APIYLHKMPE TDFLIIRTRQ GYYIRELVDI
810 820 830 840 850
FVVGQQCPLF EVPGPNSKRA NTHIRDFLQV FIYRLFWKSK DRPRRIRMED
860 870 880 890 900
IKKAFPSHSE SSIRKRLKLC ADFKRTGMDS NWWVLKSDFR LPTEEEIRAM
910 920 930 940 950
VSPEQCCAYY SMIAAEQRLK DAGYGEKSFF APEEENEEDF QMKIDDEVRT
960 970 980 990 1000
APWNTTRAFI AAMKGKCLLE VTGVADPTGC GEGFSYVKIP NKPTQQKDDK
1010 1020 1030 1040 1050
EPQPVKKTVT GTDADLRRLS LKNAKQLLRK FGVPEEEIKK LSRWEVIDVV
1060 1070 1080 1090 1100
RTMSTEQARS GEGPMSKFAR GSRFSVAEHQ ERYKEECQRI FDLQNKVLSS
1110 1120 1130 1140 1150
TEVLSTDTDS SSAEDSDFEE MGKNIENMLQ NKKTSSQLSR EREEQERKEL
1160 1170 1180 1190 1200
QRMLLAAGSA TSGNNHRDDD TASVTSLNSS ATGRCLKIYR TFRDEEGKEY
1210 1220 1230 1240 1250
VRCETVRKPA VIDAYVRIRT TKDEEFIRKF ALFDEQHREE MRKERRRIQE
1260 1270 1280 1290 1300
QLRRLKRNQE KEKLKGPPEK KPKKMKERPD LKLKCGACGA IGHMRTNKFC
1310 1320 1330 1340 1350
PLYYQTNAPP SNPVAMTEEQ EEELEKTVIH NDNEELIKVE GTKIVLGKQL
1360 1370 1380 1390 1400
IESADEVRRK SLVLKFPKQQ LPPKKKRRVG TTVHCDYLNR PHKSIHRRRT
1410 1420 1430 1440 1450
DPMVTLSSIL ESIINDMRDL PNTYPFHTPV NAKVVKDYYK IITRPMDLQT
1460 1470 1480 1490 1500
LRENVRKRLY PSREEFREHL ELIVKNSATY NGPKHSLTQI SQSMLDLCDE
1510 1520 1530 1540 1550
KLKEKEDKLA RLEKAINPLL DDDDQVAFSF ILDNIVTQKM MAVPDSWPFH
1560 1570 1580 1590 1600
HPVNKKFVPD YYKVIVSPMD LETIRKNISK HKYQSRESFL DDVNLILANS
1610 1620 1630 1640 1650
VKYNGPESQY TKTAQEIVNV CYQTLTEYDE HLTQLEKDIC TAKEAALEEA
1660 1670 1680 1690 1700
ELESLDPMTP GPYTPQPPDL YDTNTSLSMS RDASVFQDES NMSVLDIPTA
1710 1720 1730 1740 1750
TPEKQVTQEG EDGDGDLADE EEGTVQQPQA SVLYEDLLMS EGEDDEEDAG
1760 1770 1780 1790 1800
SDEEGDNPFS AIQLSESGSD SDVGSGGIRP KQPRMLQENT RMGMENEESM
1810 1820 1830 1840 1850
MSYEGDGGEA SHGLEDSNIS YGSYEEPDPK SNTQDTSFSS IGGYEVSEEE
1860 1870 1880 1890
EDEEEEEQRS GPSVLSQVHL SEDEEDSEDF HSIAGDSDLD SDE
Length:1,893
Mass (Da):214,723
Last modified:March 28, 2018 - v1
Checksum:i2AF0D8CADE135B3B
GO

Genome annotation databases

EnsembliENSSBOT00000041019; ENSSBOP00000024159; ENSSBOG00000028005

Similar proteinsi

Entry informationi

Entry nameiA0A2K6TX42_SAIBB
AccessioniPrimary (citable) accession number: A0A2K6TX42
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: June 20, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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