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Protein
Submitted name:

Peroxisome proliferator activated receptor delta

Gene

PPARD

Organism
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionReceptorSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Peroxisome proliferator activated receptor deltaImported
Gene namesi
Name:PPARDImported
OrganismiSaimiri boliviensis boliviensis (Bolivian squirrel monkey)Imported
Taxonomic identifieri39432 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeSaimiriinaeSaimiri
Proteomesi
  • UP000233220 Componenti: Whole Genome Shotgun Assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini113 – 341NR LBDInterPro annotationAdd BLAST229

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili308 – 328Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.SAAS annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00870000136388

Family and domain databases

InterProiView protein in InterPro
IPR003074 1Cnucl_rcpt
IPR003075 1Cnucl_rcpt_B
IPR035500 NHR_like_dom_sf
IPR000536 Nucl_hrmn_rcpt_lig-bd
IPR001723 Nuclear_hrmn_rcpt
PfamiView protein in Pfam
PF00104 Hormone_recep, 1 hit
PRINTSiPR01288 PROXISOMEPAR
PR01290 PROXISOMPABR
PR00398 STRDHORMONER
SMARTiView protein in SMART
SM00430 HOLI, 1 hit
SUPFAMiSSF48508 SSF48508, 1 hit
PROSITEiView protein in PROSITE
PS51843 NR_LBD, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A2K6TSL3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEQPQEEAPE VREEEEKEEV AEAEGAPELN GGPQHPLPSS SYTAIRFGRM
60 70 80 90 100
PEAEKRKLVA GLTANEGSQY NPQVADLKAF SQHIYNAYLK NFNMTKKKAR
110 120 130 140 150
SILTGKASHT PPFVIHDIET LWQAEKGLVW KQLVNGLPPY KEISVHVFYR
160 170 180 190 200
CQCTTVETVR ELTEFAKSIP SFSSLFLNDQ VTLLKYGVHE AIFAMLASIV
210 220 230 240 250
NKDGLLVANG SGFVTREFLR SLRKPFSDII EPKFEFAVKF NALELDDSDL
260 270 280 290 300
ALFIAAIILC GDRPGLMNVP QVEAIQDTIL RALEFHLQTN HPDAQYLFPK
310 320 330 340
LLQKMADLRQ LVTEHAQMMQ RIKKTETETS LHPLLQEIYK DMY
Length:343
Mass (Da):38,909
Last modified:March 28, 2018 - v1
Checksum:i11797E406F8DC485
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2K6TSC0A0A2K6TSC0_SAIBB
Peroxisome proliferator activated r...
PPARD
441Annotation score:

Genome annotation databases

EnsembliENSSBOT00000039408; ENSSBOP00000022558; ENSSBOG00000027821

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSBOT00000039408; ENSSBOP00000022558; ENSSBOG00000027821

Phylogenomic databases

GeneTreeiENSGT00870000136388

Family and domain databases

InterProiView protein in InterPro
IPR003074 1Cnucl_rcpt
IPR003075 1Cnucl_rcpt_B
IPR035500 NHR_like_dom_sf
IPR000536 Nucl_hrmn_rcpt_lig-bd
IPR001723 Nuclear_hrmn_rcpt
PfamiView protein in Pfam
PF00104 Hormone_recep, 1 hit
PRINTSiPR01288 PROXISOMEPAR
PR01290 PROXISOMPABR
PR00398 STRDHORMONER
SMARTiView protein in SMART
SM00430 HOLI, 1 hit
SUPFAMiSSF48508 SSF48508, 1 hit
PROSITEiView protein in PROSITE
PS51843 NR_LBD, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2K6TSL3_SAIBB
AccessioniPrimary (citable) accession number: A0A2K6TSL3
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: November 7, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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